Fly Labs and References


A B C D E F G H I J K L M N O P Q R S T U V W X Y Z


  • Jennifer Zallen Gerstner Sloan-Kettering Graduate School of Biomedical Sciences
    Tamada, M., Shi, J., Bourdot, K. S., Supriyatno, S., Palmquist, K. H., Gutierrez-Ruiz, O. L. and Zallen, J. A. (2021). Toll receptors remodel epithelia by directing planar-polarized Src and PI3K activity. Dev Cell. PubMed ID: 33932332

    Yu, H. H. and Zallen, J. A. (2020). Abl and Canoe/Afadin mediate mechanotransduction at tricellular junctions. Science 370(6520). PubMed ID: 33243859

    Kasza, K. E., Supriyatno, S. and Zallen, J. A. (2019). Cellular defects resulting from disease-related myosin II mutations in Drosophila. Proc Natl Acad Sci U S A. PubMed ID: 31615886

    Pare, A. C., Naik, P., Shi, J., Mirman, Z., Palmquist, K. H. and Zallen, J. A. (2019). An LRR Receptor-Teneurin System Directs Planar Polarity at Compartment Boundaries. Dev Cell. PubMed ID: 31495696

    Razzell, W., Bustillo, M. E. and Zallen, J. A. (2018). The force-sensitive protein Ajuba regulates cell adhesion during epithelial morphogenesis. J Cell Biol. PubMed ID: 30006462

    Farrell, D. L., Weitz, O., Magnasco, M. O. and Zallen, J. A. (2017). SEGGA: a toolset for rapid automated analysis of epithelial cell polarity and dynamics. Development 144(9): 1725-1734. PubMed ID: 28465336

    Spencer, A. K., Schaumberg, A. J. and Zallen, J. A. (2017). Scaling of cytoskeletal organization with cell size in Drosophila. Mol Biol Cell [Epub ahead of print]. PubMed ID: 28404752

    Vichas, A., Laurie, M.T. and Zallen, J.A. (2015). The Ski2-family helicase Obelus regulates Crumbs alternative splicing and cell polarity. J Cell Biol 211: 1011-1024. PubMed ID: 26644515

    Tamada, M. and Zallen, J. A. (2015). Square cell packing in the Drosophila embryo through spatiotemporally regulated EGF receptor signaling. Dev Cell 35: 151-161. PubMed ID: 26506305

    Pare, A. C., Vichas, A., Fincher, C. T., Mirman, Z., Farrell, D. L., Mainieri, A. and Zallen, J. A. (2014). A positional Toll receptor code directs convergent extension in Drosophila. Nature. PubMed ID: 25363762

    Kasza, K. E., Farrell, D. L. and Zallen, J. A. (2014). Spatiotemporal control of epithelial remodeling by regulated myosin phosphorylation. Proc Natl Acad Sci U S A. PubMed ID: 25071215

  • Phillip Zamore University of Massachusetts Medical School, Worcester
    Jouravleva, K., Golovenko, D., Demo, G., Dutcher, R. C., Hall, T. M. T., Zamore, P. D. and Korostelev, A. A. (2022). Structural basis of microRNA biogenesis by Dicer-1 and its partner protein Loqs-PB. Mol Cell 82(21): 4049-4063.e4046. PubMed ID: 36182693

    Ge, D. T., Wang, W., Tipping, C., Gainetdinov, I., Weng, Z. and Zamore, P. D. (2019). The RNA-Binding ATPase, Armitage, Couples piRNA Amplification in Nuage to Phased piRNA Production on Mitochondria. Mol Cell. PubMed ID: 31076285

    Chang, T. H., Mattei, E., Gainetdinov, I., Colpan, C., Weng, Z. and Zamore, P. D. (2018). Maelstrom represses canonical Polymerase II transcription within bi-directional piRNA clusters in Drosophila melanogaster. Mol Cell. PubMed ID: 30527661

    Wang, W., Han, B. W., Tipping, C., Ge, D. T., Zhang, Z., Weng, Z. and Zamore, P. D. (2015). Slicing and binding by Ago3 or Aub trigger Piwi-bound piRNA production by distinct mechanisms. Mol Cell 59: 819-830. PubMed ID: 26340424

    Han, B. W., Wang, W., Li, C., Weng, Z. and Zamore, P. D. (2015). Noncoding RNA. piRNA-guided transposon cleavage initiates Zucchini-dependent, phased piRNA production. Science 348: 817-821. PubMed ID: 25977554

    Roy, C. K., Olson, S., Graveley, B. R., Zamore, P. D. and Moore, M. J. (2015). Assessing long-distance RNA sequence connectivity via RNA-templated DNA-DNA ligation. Elife 4. PubMed ID: 25866926

    Wang, W., Yoshikawa, M., Han, B. W., Izumi, N., Tomari, Y., Weng, Z. and Zamore, P. D. (2014). The initial uridine of primary piRNAs does not create the tenth adenine that is the hallmark of secondary piRNAs. Mol Cell 56: 708-716. PubMed ID: 25453759

    Han, B. W. and Zamore, P. D. (2014). piRNAs. Curr Biol 24: R730-733. PubMed ID: 25137579

    Zhang, Z., Wang, J., Schultz, N., Zhang, F., Parhad, S. S., Tu, S., Vreven, T., Zamore, P. D., Weng, Z. and Theurkauf, W. E. (2014). The HP1 Homolog Rhino Anchors a Nuclear Complex that Suppresses piRNA Precursor Splicing. Cell 157: 1353-1363. PubMed ID: 24906152

    Fukunaga, R. and Zamore, P. D. (2014). A universal small molecule, inorganic phosphate, restricts the substrate specificity of Dicer-2 in small RNA biogenesis. Cell Cycle 13. PubMed ID: 24787225

  • Daniela Zarnescu Department of Molecular and Cellular Biology, University of Arizona
    Loganathan, S., Wilson, B. A., Carey, S. B., Manzo, E., Joardar, A., Ugur, B. and Zarnescu, D. C. (2022). TDP-43 Proteinopathy Causes Broad Metabolic Alterations including TCA Cycle Intermediates and Dopamine Levels in Drosophila Models of ALS. Metabolites 12(2). PubMed ID: 35208176

    Loganathan, S., Ball, H. E., Manzo, E. and Zarnescu, D. C. (2021). Measuring Glucose Uptake in Drosophila Models of TDP-43 Proteinopathy. J Vis Exp(174). PubMed ID: 34424253

    Lehmkuhl, E. M., Loganathan, S., Alsop, E., Blythe, A. D., Kovalik, T., Mortimore, N. P., Barrameda, D., Kueth, C., Eck, R. J., Siddegowda, B. B., Joardar, A., Ball, H., Macias, M. E., Bowser, R., Van Keuren-Jensen, K. and Zarnescu, D. C. (2021). TDP-43 proteinopathy alters the ribosome association of multiple mRNAs including the glypican Dally-like protein (Dlp)/GPC6. Acta Neuropathol Commun 9(1): 52. PubMed ID: 33762006

    Manzo, E., Lorenzini, I., Barrameda, D., O'Conner, A. G., Barrows, J. M., Starr, A., Kovalik, T., Rabichow, B. E., Lehmkuhl, E. M., Shreiner, D. D., Joardar, A., Lievens, J. C., Bowser, R., Sattler, R. and Zarnescu, D. C. (2019). Glycolysis upregulation is neuroprotective as a compensatory mechanism in ALS. Elife 8. PubMed ID: 31180318

    Francois-Moutal, L., Scott, D. D., Felemban, R., Miranda, V. G., Sayegh, M. R., Perez-Miller, S., Khanna, R., Gokhale, V., Zarnescu, D. C. and Khanna, M. (2019). A small molecule targeting TDP-43's RNA recognition motifs reduces locomotor defects in a Drosophila model of ALS. ACS Chem Biol. PubMed ID: 31241884

    Manzo, E., O'Conner, A. G., Barrows, J. M., Shreiner, D. D., Birchak, G. J. and Zarnescu, D. C. (2018). Medium-chain fatty acids, beta-hydroxybutyric acid and genetic modulation of the carnitine shuttle are protective in a Drosophila model of ALS Based on TDP-43. Front Mol Neurosci 11: 182. PubMed ID: 29904341

    Daniel, S. G., Russ, A. D., Guthridge, K. M., Raina, A. I., Estes, P. S., Parsons, L. M., Richardson, H. E., Schroeder, J. A. and Zarnescu, D. C. (2018). miR-9a mediates the role of Lethal giant larvae as an epithelial growth inhibitor in Drosophila. Biol Open 7(1). PubMed ID: 29361610

    Coyne, A. N., Lorenzini, I., Chou, C. C., Torvund, M., Rogers, R. S., Starr, A., Zaepfel, B. L., Levy, J., Johannesmeyer, J., Schwartz, J. C., Nishimune, H., Zinsmaier, K., Rossoll, W., Sattler, R. and Zarnescu, D. C. (2017). Post-transcriptional inhibition of Hsc70-4/HSPA8 expression leads to synaptic vesicle cycling defects in multiple models of ALS. Cell Rep 21(1): 110-125. PubMed ID: 28978466

    Novak, S. M., Joardar, A., Gregorio, C. C. and Zarnescu, D. C. (2015). Regulation of heart rate in Drosophila via Fragile X mental retardation protein. PLoS One 10: e0142836. PubMed ID: 26571124

    Coyne, A. N., Yamada, S. B., Siddegowda, B. B., Estes, P. S., Zaepfel, B. L., Johannesmeyer, J. S., Lockwood, D. B., Pham, L. T., Hart, M. P., Cassel, J. A., Freibaum, B., Boehringer, A. V., Taylor, J. P., Reitz, A. B., Gitler, A. D. and Zarnescu, D. C. (2015). Fragile X protein mitigates TDP-43 toxicity by remodeling RNA granules and restoring translation. Hum Mol Genet. PubMed ID: 26385636

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  • Troy Zars Division of Biological Sciences, University of Missouri, Columbia
    Mishra, A., Cronley, P., Ganesan, M., Schulz, D. J. and Zars, T. (2020). Dopaminergic neurons can influence heat-box place learning in Drosophila. J Neurogenet: 1-8. PubMed ID: 31997669

    Dissel, S., Morgan, E., Duong, V., Chan, D., van Swinderen, B., Shaw, P. and Zars, T. (2020). Sleep restores place learning to the adenylyl cyclase mutant rutabaga. J Neurogenet: 1-9. PubMed ID: 31997683

    Ostrowski, D., Salari, A., Zars, M. and Zars, T. (2018). A biphasic locomotor response to acute unsignaled high temperature exposure in Drosophila. PLoS One 13(6): e0198702. PubMed ID: 29883493

    Baggett, V., Mishra, A., Kehrer, A. L., Robinson, A. O., Shaw, P. and Zars, T. (2018). Place learning overrides innate behaviors in Drosophila. Learn Mem 25(3): 122-128. PubMed ID: 29449456

    Mishra, A., Salari, A., Berigan, B. R., Miguel, K. C., Amirshenava, M., Robinson, A., Zars, B. C., Lin, J. L., Milescu, L. S., Milescu, M. and Zars, T. (2018). The Drosophila Gr28bD product is a non-specific cation channel that can be used as a novel thermogenetic tool. Sci Rep 8(1): 901. PubMed ID: 29343813

    Sitaraman, D., Kramer, E. F., Kahsai, L., Ostrowski, D. and Zars, T. (2017). Discrete serotonin systems mediate memory enhancement and escape latencies after unpredicted aversive experience in Drosophila place memory. Front Syst Neurosci 11: 92. PubMed ID: 29321732

    LaFerriere, H. and Zars, T. (2017). The Drosophila melanogaster tribbles pseudokinase is necessary for proper memory formation. Neurobiol Learn Mem 144: 68-76. PubMed ID: 28669782

    Ostrowski, D., Kahsai, L., Kramer, E. F., Knutson, P. and Zars, T. (2015). Place memory retention in Drosophila. Neurobiol Learn Mem [Epub ahead of print]. PubMed ID: 26143995

    Chen, A., Kramer, E. F., Purpura, L., Krill, J. L., Zars, T. and Dawson-Scully, K. (2011). The influence of natural variation at the foraging gene on thermotolerance in adult Drosophila in a narrow temperature range. J Comp Physiol A Neuroethol Sens Neural Behav Physiol 197: 1113-1118. PubMed ID: 21861180

    LaFerriere, H., Ostrowski, D., Guarnieri, D. J. and Zars, T. (2011). The arouser EPS8L3 gene is critical for normal memory in Drosophila. PLoS One 6: e22867. PubMed ID: 21818402

  • Martin Zeidler Department of Biomedical Science, University of Sheffield
    Fisher, K. H., Fragiadaki, M., Pugazhendhi, D., Bausek, N., Arredondo, M. A., Thomas, S. J., Brown, S. and Zeidler, M. P. (2018). A genome-wide RNAi screen identifies MASK as a positive regulator of cytokine receptor stability. J Cell Sci. PubMed ID: 29848658

    Fisher, K. H., Stec, W., Brown, S. and Zeidler, M. P. (2015). Mechanisms of JAK/STAT pathway negative regulation by the short coreceptor Eye Transformer / Latran. Mol Biol Cell. PubMed ID: 26658615

    Thomas, S., Fisher, K. H., Snowden, J. A., Danson, S. J., Brown, S. and Zeidler, M. P. (2015). Methotrexate is a JAK/STAT pathway inhibitor. PLoS One 10: e0130078. PubMed ID: 26131691

    Bausek, N. and Zeidler, M. P. (2013). Galpha73B is a downstream effector of JAK/STAT signalling and a regulator of Rho1 in Drosophila haematopoiesis. J Cell Sci. PubMed ID: 24163435

    Zeidler, M. P. and Bausek, N. (2013). The Drosophila JAK-STAT pathway. JAKSTAT 2: e25353. PubMed ID: 24069564

    Wells, R. E., Barry, J. D., Warrington, S. J., Cuhlmann, S., Evans, P., Huber, W., Strutt, D. and Zeidler, M. P. (2013). Control of tissue morphology by Fasciclin III-mediated intercellular adhesion. Development. PubMed ID: 23946443

    Johnstone, K., Wells, R. E., Strutt, D. and Zeidler, M. P. (2013). Localised Jak/STAT pathway activation is required for Drosophila wing hinge development. PLoS One 8: e65076. PubMed ID: 23741461

    Fisher, K. H., Wright, V. M., Taylor, A., Zeidler, M. P. and Brown, S. (2012). Advances in genome-wide RNAi cellular screens: a case study using the Drosophila JAK/STAT pathway. BMC Genomics 13: 506. PubMed ID: 23006893

    Stec, W. J. and Zeidler, M. P. (2011). Drosophila SOCS Proteins. J Signal Transduct 2011: 894510. PubMed ID: 22203896

    Wright, V. M., Vogt, K. L., Smythe, E. and Zeidler, M. P. (2011). Differential activities of the Drosophila JAK/STAT pathway ligands Upd, Upd2 and Upd3. Cell Signal 23: 920-927. PubMed ID: 21262354

  • Julia Zeitlinger Stowers Insitute for Medical Research, Kansas City
    Vincent, B. J., Rice, G. R., Wong, G. M., Glassford, W. J., Downs, K. I., Shastay, J. L., Charles-Obi, K., Natarajan, M., Gogol, M., Zeitlinger, J. and Rebeiz, M. (2019). An atlas of transcription factors expressed in male pupal terminalia of Drosophila melanogaster. G3 (Bethesda). PubMed ID: 31619460

    Tettey, T. T., Gao, X., Shao, W., Li, H., Story, B. A., Chitsazan, A. D., Glaser, R. L., Goode, Z. H., Seidel, C. W., Conaway, R. C., Zeitlinger, J., Blanchette, M. and Conaway, J. W. (2019). A Role for FACT in RNA Polymerase II Promoter-Proximal Pausing. Cell Rep 27(13): 3770-3779. PubMed ID: 31242411

    Shao, W., Alcantara, S. G. and Zeitlinger, J. (2019). Reporter-ChIP-nexus reveals strong contribution of the Drosophila initiator sequence to RNA polymerase pausing. Elife 8. PubMed ID: 31021316

    Papagianni, A., Fores, M., Shao, W., He, S., Koenecke, N., Andreu, M. J., Samper, N., Paroush, Z., Gonzalez-Crespo, S., Zeitlinger, J. and Jimenez, G. (2018). Capicua controls Toll/IL-1 signaling targets independently of RTK regulation. Proc Natl Acad Sci U S A 115(8): 1807-1812. PubMed ID: 29432195

    Pascual, J., Jacobs, J., Sansores-Garcia, L., Natarajan, M., Zeitlinger, J., Aerts, S., Halder, G. and Hamaratoglu, F. (2017). Hippo Reprograms the Transcriptional Response to Ras Signaling. Dev Cell 42(6): 667-680.e664. PubMed ID: 28950103

    Koenecke, N., Johnston, J., He, Q., Meier, S. and Zeitlinger, J. (2016). Drosophila poised enhancers are generated during tissue patterning with the help of repression. Genome Res [Epub ahead of print]. PubMed ID: 27979994

    Koenecke, N., Johnston, J., Gaertner, B., Natarajan, M. and Zeitlinger, J. (2016). Genome-wide identification of Drosophila dorso-ventral enhancers by differential histone acetylation analysis. Genome Biol 17: 196. PubMed ID: 27678375

    Sun, Y., Nien, C.Y., Chen, K., Liu, H.Y., Johnston, J., Zeitlinger, J. and Rushlow, C. (2015). Zelda overcomes the high intrinsic nucleosome barrier at enhancers during Drosophila zygotic genome activation. Genome Res [Epub ahead of print]. PubMed ID: 26335633

    Gaertner, B. and Zeitlinger, J. (2014). RNA polymerase II pausing during development. Development 141: 1179-1183. PubMed ID: 24595285

    Bardet, A. F., Steinmann, J., Bafna, S., Knoblich, J. A., Zeitlinger, J. and Stark, A. (2013). Identification of transcription factor binding sites from ChIP-seq data at high-resolution. Bioinformatics. PubMed ID: 23980024

  • Andrew Zelhof Department of Biology, Indiana University, Bloomington
    Rylee, J., Mahato, S., Aldrich, J., Bergh, E., Sizemore, B., Feder, L. E., Grega, S., Helms, K., Maar, M., Britt, S. G. and Zelhof, A. C. (2022). A TRiP RNAi screen to identify molecules necessary for Drosophila photoreceptor differentiation. G3 (Bethesda) 12(11). PubMed ID: 36218412

    Han, S., Basting, P. J., Dias, G. B., Luhur, A., Zelhof, A. C. and Bergman, C. M. (2021). Transposable element profiles reveal cell line identity and loss of heterozygosity in Drosophila cell culture. Genetics 219(2). PubMed ID: 34849875

    Mariyappa, D., Luhur, A., Overton, D. and Zelhof, A. C. (2021). Generation of Drosophila attP containing cell lines using CRISPR-Cas9. G3 (Bethesda). PubMed ID: 33963853

    Luhur, A., Mariyappa, D., Klueg, K. M., Buddika, K., Tennessen, J. M. and Zelhof, A. C. (2020). Adapting Drosophila melanogaster Cell Lines to Serum-Free Culture Conditions. G3 (Bethesda). PubMed ID: 33028628

    Mahato, S., Nie, J., Plachetzki, D. C. and Zelhof, A. C. (2018). A mosaic of independent innovations involving eyes shut are critical for the evolutionary transition from fused to open rhabdoms. Dev Biol. PubMed ID: 30243673

    Liang, X., Mahato, S., Hemmerich, C. and Zelhof, A. C. (2016). Two temporal functions of Glass: Ommatidium patterning and photoreceptor differentiation. Dev Biol. PubMed ID: 27105580
    Nie, J., Mahato, S. and Zelhof, A. C. (2015). Imaging the Drosophila retina: zwitterionic buffers PIPES and HEPES induce morphological artifacts in tissue fixation. BMC Dev Biol 15: 10. PubMed ID: 25645690

    Nie, J., Mahato, S. and Zelhof, A. C. (2014). The actomyosin machinery is required for Drosophila retinal lumen formation. PLoS Genet 10: e1004608. PubMed ID: 25233220

    Terrell, D., Xie, B., Workman, M., Mahato, S., Zelhof, A., Gebelein, B. and Cook, T. (2012). OTX2 and CRX rescue overlapping and photoreceptor-specific functions in the Drosophila eye. Dev Dyn 241: 215-228. PubMed ID: 22113834

  • Kai Zeng Department of Animal & Plant Sciences, University of Sheffield
    Jackson, B. C., Campos, J. L., Haddrill, P. R., Charlesworth, B. and Zeng, K. (2017). Variation in the intensity of selection on codon bias over time causes contrasting patterns of base composition evolution in Drosophila. Genome Biol Evol. PubMed ID: 28082609

    Jackson, B. C., Campos, J. L. and Zeng, K. (2014). The effects of purifying selection on patterns of genetic differentiation between Drosophila melanogaster populations. Heredity (Edinb). PubMed ID: 25227256

    Campos, J. L., Zeng, K., Parker, D. J., Charlesworth, B. and Haddrill, P. R. (2013). Codon usage bias and effective population sizes on the X chromosome versus the autosomes in Drosophila melanogaster. Mol Biol Evol 30: 811-823. PubMed ID: 23204387

    Fang, S., Yukilevich, R., Chen, Y., Turissini, D. A., Zeng, K., Boussy, I. A. and Wu, C. I. (2012). Incompatibility and competitive exclusion of genomic segments between sibling Drosophila species. PLoS Genet 8: e1002795. PubMed ID: 22761593

  • Christos Zervas Biomedical Research Foundation Academy of Athens
    Kaltezioti, V., Vakaloglou, K. M., Charonis, A. S. and Zervas, C. G. (2021). Evidence of Swim secretion and association with extracellular matrix in the Drosophila embryo. Int J Dev Biol. PubMed ID: 34881800

    Vakaloglou, K. M., Mouratidou, M., Keramidioti, A. and Zervas, C. G. (2021). Differential Expression of Drosophila Transgelins Throughout Development. Front Cell Dev Biol 9: 648568. PubMed ID: 34322481

    Vakaloglou, K. M., Chrysanthis, G. and Zervas, C. G. (2016). IPP complex reinforces adhesion by relaying tension-dependent signals to inhibit integrin turnover. Cell Rep 14: 2668-2682. PubMed ID: 26972014

    Velentzas, P. D., Velentzas, A. D., Pantazi, A. D., Mpakou, V. E., Zervas, C. G., Papassideri, I. S. and Stravopodis, D. J. (2013). Proteasome, but not autophagy, disruption results in severe eye and wing dysmorphia: a subunit- and regulator-dependent process in Drosophila. PLoS One 8: e80530. PubMed ID: 24282550

    Chountala, M., Vakaloglou, K. M. and Zervas, C. G. (2012). Parvin overexpression uncovers tissue-specific genetic pathways and disrupts F-actin to induce apoptosis in the developing epithelia in Drosophila. PLoS One 7: e47355. PubMed ID: 23077599

  • Rong Grace Zhai University of Miami Health Systems
    Brazill, J. M., Zhu, Y., Li, C. and Zhai, R. G. (2018). Quantitative Cell Biology of Neurodegeneration in Drosophila Through Unbiased Analysis of Fluorescently Tagged Proteins Using ImageJ. J Vis Exp(138). PubMed ID: 30124668

    Brazill, J. M., Cruz, B., Zhu, Y. and Zhai, R. G. (2018). Nmnat mitigates sensory dysfunction in a Drosophila model of paclitaxel-induced peripheral neuropathy. Dis Model Mech 11(6). PubMed ID: 29716954

    Ruan, K., Zhu, Y., Li, C., Brazill, J. M. and Zhai, R. G. (2015). Alternative splicing of Drosophila Nmnat functions as a switch to enhance neuroprotection under stress. Nat Commun 6: 10057. PubMed ID: 26616331

  • Bing Zhang Division of Biological Sciences, University of Missouri
    Padash Barmchi, M., Samarasekera, G., Gilbert, M., Auld, V.J. and Zhang, B. (2016). Magi is associated with the Par complex and functions antagonistically with Bazooka to regulate the apical polarity complex. PLoS One 11: e0153259. PubMed ID: 27074039

    Vanlandingham, P. A., Barmchi, M. P., Royer, S., Green, R., Bao, H., Reist, N. and Zhang, B. (2014). AP180 Couples Protein Retrieval to Clathrin-mediated Endocytosis of Synaptic Vesicles. Traffic. PubMed ID: 24456281

    Vanlandingham, P. A., Fore, T. R., Chastain, L. R., Royer, S. M., Bao, H., Reist, N. E. and Zhang, B. (2013). Epsin 1 Promotes Synaptic Growth by Enhancing BMP Signal Levels in Motoneuron Nuclei. PLoS One 8: e65997. PubMed ID: 23840387

    Kumimoto, E. L., Fore, T. R., Zhang, B. (2013) Transcriptome Profiling Following Neuronal and Glial Expression of ALS-Linked SOD1 in Drosophila. G3 (Bethesda). PubMed ID: 23550139

    Kim, Y, J., Bao, H., Bonanno, L., Zhang, B. and Serpe, M. (2012). Drosophila Neto is essential for clustering glutamate receptors at the neuromuscular junction. Genes Dev. 26: 974-987. PubMed ID: 22499592

    Koles, K., et al. (2012). Mechanism of Evenness interrupted (Evi)-exosome release at synaptic boutons. J. Biol. Chem 287: 16820-34. PubMed ID: 22437826

  • Lei Zhang Institute of Biochemistry and Cell Biology, Shanghai
    Wang, C., Shui, K., Ma, S., Lin, S., Zhang, Y., Wen, B., Deng, W., Xu, H., Hu, H., Guo, A., Xue, Y. and Zhang, L. (2020). Integrated omics in Drosophila uncover a circadian kinome. Nat Commun 11(1): 2710. PubMed ID: 32483184

    Hao, X., Wang, S., Lu, Y., Yu, W., Li, P., Jiang, D., Guo, T., Li, M., Li, J., Xu, J., Wu, W., Ho, M. S. and Zhang, L. (2020). Lola regulates Drosophila adult midgut homeostasis via non-canonical hippo signaling. Elife 9. PubMed ID: 31934851

    Bu, B., Chen, L., Zheng, L., He, W. and Zhang, L. (2019). Nipped-A regulates the Drosophila circadian clock via histone deubiquitination. EMBO J: e101259. PubMed ID: 31538360

    Li, M., Hu, X., Zhang, S., Ho, M. S., Wu, G. and Zhang, L. (2019). Traffic jam regulates the function of the ovarian germline stem cell progeny differentiation niche during pre-adult stage in Drosophila. Sci Rep 9(1): 10124. PubMed ID: 31300663

    Bu, B., He, W., Song, L. and Zhang, L. (2019). Nuclear envelope protein MAN1 regulates the Drosophila circadian clock via Period. Neurosci Bull. PubMed ID: 31230212

    Zhang, S., Pan, C., Lv, X., Wu, W., Chen, H., Wu, W., Wu, H., Zhang, L. and Zhao, Y. (2017). Repression of Abd-B by Polycomb is critical for cell identity maintenance in adult Drosophila testis. Sci Rep 7(1): 5101. PubMed ID: 28698559

    An, Y., Xue, G., Shaobo, Y., Mingxi, D., Zhou, X., Yu, W., Ishibashi, T., Zhang, L. and Yan, Y. (2017). Apical constriction is driven by a pulsatile apical myosin network in delaminating Drosophila neuroblasts. Development. PubMed ID: 28506995

    Xu, J., Hao, X., Yin, M. X., Lu, Y., Jin, Y., Xu, J., Ge, L., Wu, W., Ho, M., Yang, Y., Zhao, Y. and Zhang, L. (2017). Function of Nerfin-1 in preventing medulla neurons dedifferentiation requires its inhibition of Notch activity. Development. PubMed ID: 28242614

    Wang, S., Lu, Y., Yin, M. X., Wang, C., Wu, W., Li, J., Wu, W., Ge, L., Hu, L., Zhao, Y. and Zhang, L. (2016). Importin α1 mediates Yorkie nuclear import via an N-terminal non-canonical nuclear localization signal. J Biol Chem 291: 7926-7937. PubMed ID: 26887950

  • Mingjie Zhang Division of Life Science, State Key Laboratory of Molecular Neuroscience, Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong
    Chen, W., Shen, Z., Asteriti, S., Chen, Z., Ye, F., Sun, Z., Wan, J., Montell, C., Hardie, R. C., Liu, W. and Zhang, M. (2020). Calmodulin binds to Drosophila TRP with an unexpected mode. Structure. PubMed ID: 33326749

    Ye, F., Huang, Y., Li, J., Ma, Y., Xie, C., Liu, Z., Deng, X., Wan, J., Xue, T., Liu, W. and Zhang, M. (2018). An unexpected INAD PDZ tandem-mediated PLCbeta binding in Drosophila photo receptors. Elife 7. PubMed ID: 30526850

    Wen, D. T., Zheng, L., Ni, L., Wang, H., Feng, Y. and Zhang, M. (2016). The expression of CG9940 affects the adaptation of cardiac function, mobility, and lifespan to exercise in aging Drosophila. Exp Gerontol 83: 6-14. PubMed ID: 27448710

    Ye, F., Liu, W., Shang, Y. and Zhang, M. (2016). An exquisitely specific PDZ/target recognition revealed by the structure of INAD PDZ3 in complex with TRP channel tail. Structure [Epub ahead of print]. PubMed ID: 26853938

    Wei, Z., Li, Y., Ye, F. and Zhang, M. (2015). Structural basis for the phosphorylation-regulated interaction between the cytoplasmic tail of cell polarity protein crumbs and the actin-binding protein moesin. J Biol Chem 290: 11384-11392. PubMed ID: 25792740

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    Liu, Z., Tabuloc, C. A., Xue, Y., Cai, Y., McIntire, P., Niu, Y., Lam, V. H., Chiu, J. C. and Zhang, Y. (2019). Splice variants of DOMINO control Drosophila circadian behavior and pacemaker neuron maintenance. PLoS Genet 15(10): e1008474. PubMed ID: 31658266

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  • Igor Zhimulev Institute of Molecular and Cellular Biology of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk
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    Wu, W., Du, S., Shi, W., Liu, Y., Hu, Y., Xie, Z., Yao, X., Liu, Z., Ma, W., Xu, L., Ma, C. and Zhong, Y. (2019). Inhibition of Rac1-dependent forgetting alleviates memory deficits in animal models of Alzheimer's disease. Protein Cell. PubMed ID: 31321704

    Hu, W., Peng, Y., Sun, J., Zhang, F., Zhang, X., Wang, L., Li, Q. and Zhong, Y. (2018). Fan-shaped body neurons in the Drosophila brain regulate both innate and conditioned nociceptive avoidance. Cell Rep 24(6): 1573-1584. PubMed ID: 30089267

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  • Bing Zhou Tsinghua University, Beijing
    Xiao, G., Zhao, M., Liu, Z., Du, F. and Zhou, B. (2021). Zinc antagonizes iron-regulation of tyrosine hydroxylase activity and dopamine production in Drosophila melanogaster. BMC Biol 19(1): 236. PubMed ID: 34732185

    Xiao, G., Liu, Z. H., Zhao, M., Wang, H. L. and Zhou, B. (2019). Transferrin 1 functions in iron trafficking and genetically interacts with Ferritin in Drosophila melanogaster. Cell Rep 26(3): 748-758.e745. PubMed ID: 30650364

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    Wang, H., Wang, K., Xiao, G., Ma, J., Wang, B., Shen, S., Fu, X., Zou, G. and Zou, B. (2015). Molecular mechanisms for high hydrostatic pressure-induced wing mutagenesis in Drosophila melanogaster. Sci Rep 5: 14965. PubMed ID: 26446369

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  • Chuan Zhou Institute of Zoology, Chinese Academy of Sciences, Beijing
    Wu, F., Deng, B., Xiao, N., Wang, T., Li, Y., Wang, R., Shi, K., Luo, D. G., Rao, Y. and Zhou, C. (2020). A neuropeptide regulates fighting behavior in Drosophila melanogaster. Elife 9. PubMed ID: 32314736

    Ying, X., Liu, Y., Chen, L., Bo, Q., Xu, Q., Li, F., Zhou, C. and Cheng, L. (2019). Analysis of translation control tumor protein related to deltamethrin stress in Drosophila kc cells. Chemosphere 231: 450-456. PubMed ID: 31146137

    Duan, L., Qin, X., He, Y., Sang, X., Pan, J., Xu, T., Men, J., Tanzi, R. E., Li, A., Ma, Y. and Zhou, C. (2018). Segmentation of Drosophila heart in optical coherence microscopy images using convolutional neural networks. J Biophotonics 11(12): e201800146. PubMed ID: 29992766

    Duan, H., de Navas, L. F., Hu, F., Sun, K., Mavromatakis, Y. E., Viets, K., Zhou, C., Kavaler, J., Johnston, R. J., Tomlinson, A. and Lai, E. C. (2018). The mir-279/996 cluster represses receptor tyrosine kinase signaling to determine cell fates in the Drosophila eye. Development 145(7). PubMed ID: 29540498

  • Lei Zhou Department of Molecular Genetic and Microbiology, University of Florida, Gainesville
    Witt, E., Shao, Z., Hu, C., Krause, H. M. and Zhao, L. (2021). Single-cell RNA-sequencing reveals pre-meiotic X-chromosome dosage compensation in Drosophila testis. PLoS Genet 17(8): e1009728. PubMed ID: 34403408

    Li, G. and Zhou, L. (2013). Genome-wide identification of chromatin transitional regions reveals diverse mechanisms defining the boundary of facultative heterochromatin. PLoS One 8: e67156. PubMed ID: 23840609

    Liu, B., Behura, S. K., Clem, R. J., Schneemann, A., Becnel, J., Severson, D. W. and Zhou, L. (2013). P53-mediated rapid induction of apoptosis conveys resistance to viral infection in Drosophila melanogaster. PLoS Pathog 9: e1003137. PubMed ID: 23408884

    Yenerall, P., Krupa, B. and Zhou, L. (2011). Mechanisms of intron gain and loss in Drosophila. BMC Evol Biol 11: 364. PubMed ID: 22182367

    Zhang, C., Liu, B., Li, G. and Zhou, L. (2011). Extra sex combs, chromatin, and cancer: exploring epigenetic regulation and tumorigenesis in Drosophila. J Genet Genomics 38: 453-460. PubMed ID: 22035866

  • Rui Zhou Sanford Burnham Prebys, La Jolla, California
    Xiong, X. P., Liang, W., Liu, W., Xu, S., Li, J. L., Tito, A., Situ, J., Martinez, D., Wu, C., Perera, R. J., Zhang, S. and Zhou, R. (2022). The circular RNA Edis regulates neurodevelopment and innate immunity. PLoS Genet 18(10): e1010429. PubMed ID: 36301822

    Xiong, X.P., Kurthkoti, K., Chang, K.Y., Li, J.L., Ren, X., Ni, J.Q., Rana, T.M. and Zhou, R. (2016). miR-34 modulates innate immunity and ecdysone signaling in Drosophila. PLoS Pathog 12: e1006034. PubMed ID: 27893816

    Xiong, X. P., Vogler, G., Kurthkoti, K., Samsonova, A. and Zhou, R. (2015). SmD1 Modulates the miRNA Pathway Independently of Its Pre-mRNA Splicing Function. PLoS Genet 11: e1005475. PubMed ID: 26308709

    Lim, S. J., Scott, A., Xiong, X. P., Vahidpour, S., Karijolich, J., Guo, D., Pei, S., Yu, Y. T., Zhou, R. and Li, W. X. (2014). Requirement for CRIF1 in RNA interference and Dicer-2 stability. RNA Biol 11(9): 1171-1179. PubMed ID: 25483042

    Xiong, X. P., Kurthkoti, K., Chang, K. Y., Lichinchi, G., De, N., Schneemann, A., Macrae, I. J., Rana, T. M., Perrimon, N. and Zhou, R. (2013). Core small nuclear ribonucleoprotein particle splicing factor SmD1 modulates RNA interference in Drosophila. Proc Natl Acad Sci U S A. PubMed ID: 24067655

    Zhou, R., Mohr, S., Hannon, G. J. and Perrimon, N. (2013). Inducing RNAi in Drosophila cells by transfection with dsRNA. Cold Spring Harb Protoc 2013: 461-463. PubMed ID: 23637371

    Ni, J. Q., Zhou, R., Czech, B., Liu, L. P., Holderbaum, L., Yang-Zhou, D., Shim, H. S., Tao, R., Handler, D., Karpowicz, P., Binari, R., Booker, M., Brennecke, J., Perkins, L. A., Hannon, G. J. and Perrimon, N. (2011). A genome-scale shRNA resource for transgenic RNAi in Drosophila. Nat Methods 8: 405-407. PubMed ID: 21460824

  • Xi Zhou Insect & Vector-Borne Virology Lab, Wuhan University
    Liu, Y., Wang, M., Liu, X., Quan, J., Fang, Y., Liu, Y., Qiu, Y., Yu, Y. and Zhou, X. (2019). Drosophila Trf4-1 involves in mRNA and primary miRNA transcription. Biochem Biophys Res Commun 511(4): 806-812. PubMed ID: 30837153

    Wang, Z., Wu, D., Liu, Y., Xia, X., Gong, W., Qiu, Y., Yang, J., Zheng, Y., Li, J., Wang, Y. F., Xiang, Y., Hu, Y. and Zhou, X. (2015). Drosophila Dicer-2 has an RNA interference-independent function that modulates Toll immune signaling. Sci Adv 1: e1500228. PubMed ID: 26601278

    Zhai, Y., Lin, Q., Zhou, X., Zhang, X., Liu, T. and Yu, Y. (2014). Identification and validation of reference genes for quantitative real-time PCR in Drosophila suzukii (Diptera: Drosophilidae). PLoS One 9: e106800. PubMed ID: 25198611

    Huang, Q., Tang, X., Wang, G., Fan, Y., Ray, L., Bergmann, A., Belenkaya, T. Y., Ling, X., Yan, D., Lin, Y., Ye, X., Shi, W., Zhou, X., Lu, F., Qu, J. and Lin, X. (2014). Ubr3 E3 ligase regulates apoptosis by controlling the activity of DIAP1 in Drosophila. Cell Death Differ 21: 1961-1970. PubMed ID: 25146930

  • Alan Zhu School of Life Sciences, Peking University
    Sun, Y., Qiu, R., Li, X., Cheng, Y., Gao, S., Kong, F., Liu, L. and Zhu, Y. (2020). Social attraction in Drosophila is regulated by the mushroom body and serotonergic system. Nat Commun 11(1): 5350. PubMed ID: 33093442

    Liu, M., Li, Y., Liu, A., Li, R., Su, Y., Du, J., Li, C. and Zhu, A. J. (2016). The exon junction complex regulates the splicing of cell polarity gene dlg1 to control Wingless signaling in development. Elife 5. PubMed ID: 27536874

    Du, J., Zhang, J., He, T., Li, Y., Su, Y., Tie, F., Liu, M., Harte, P. J. and Zhu, A. J. (2016). Stuxnet facilitates the degradation of Polycomb protein during development. Dev Cell 37: 507-519. PubMed ID: 27326929

    Zhang, J., Du, J., Lei, C., Liu, M. and Zhu, A. J. (2014). Ubpy controls the stability of the ESCRT-0 subunit Hrs in development. Development. PubMed ID: 24574010

    Zhang, J., Liu, M., Su, Y., Du, J. and Zhu, A. J. (2012). A Targeted In Vivo RNAi Screen Reveals Deubiquitinases as New Regulators of Notch Signaling. G3 (Bethesda) 2: 1563-1575. PubMed ID: 23275879

    Du, J., Zhang, J., Su, Y., Liu, M., Ospina, J. K., Yang, S. and Zhu, A. J. (2011). In vivo RNAi screen reveals neddylation genes as novel regulators of Hedgehog signaling. PLoS One 6: e24168. PubMed ID: 21931660

    Su, Y., Ospina, J. K., Zhang, J., Michelson, A. P., Schoen, A. M. and Zhu, A. J. (2011). Sequential phosphorylation of smoothened transduces graded hedgehog signaling. Sci Signal 4: ra43. PubMed ID: 21730325

  • Sijun Zhu Institute For Human Performance, Suny, Syracuse, NY
    Li, X., Chen, R. and Zhu, S. (2017). bHLH-O proteins balance the self-renewal and differentiation of Drosophila neural stem cells by regulating Earmuff expression. Dev Biol [Epub ahead of print]. PubMed ID: 28899667

    Xie, Y., Li, X., Deng, X., Hou, Y., O'Hara, K., Urso, A., Peng, Y., Chen, L. and Zhu, S. (2016). The Ets protein pointed prevents both premature differentiation and dedifferentiation of Drosophila intermediate neural progenitors. Development [Epub ahead of print]. PubMed ID: 27510969

    Li, X., Xie, Y. and Zhu, S. (2016). Notch maintains Drosophila type II neuroblasts by suppressing the expression of the Fez transcription factor Earmuff. Development [Epub ahead of print]. PubMed ID: 27151950

    Xie, Y., Li, X., Zhang, X., Mei, S., Li, H., Urso, A. and Zhu, S. (2014). The Sp8 transcription factor Buttonhead prevents premature differentiation of intermediate neural progenitors. Elife 3. PubMed ID: 25285448

    Rumpf, S., Bagley, J. A., Thompson-Peer, K. L., Zhu, S., Gorczyca, D., Beckstead, R. B., Jan, L. Y. and Jan, Y. N. (2014). Drosophila Valosin-Containing Protein is required for dendrite pruning through a regulatory role in mRNA metabolism. Proc Natl Acad Sci U S A 111: 7331-7336. PubMed ID: 24799714

    Zhu, S., Wildonger, J., Barshow, S., Younger, S., Huang, Y. and Lee, T. (2012). The bHLH repressor Deadpan regulates the self-renewal and specification of Drosophila larval neural stem cells independently of Notch. PLoS One 7: e46724. PubMed ID: 23056424

  • Yan Zhu State Key Laboratory of Brain & Cognitive Sciences, Institute of Biophysics, Chinese Academy of Science, Beijing
    Hu, S. W., Yang, Y. T., Sun, Y., Zhan, Y. P. and Zhu, Y. (2020). Serotonin Signals Overcome Loser Mentality in Drosophila. iScience 23(11): 101651. PubMed ID: 33117967

    Ji, X., Yuan, D., Wei, H., Cheng, Y., Wang, X., Yang, J., Hu, P., Gestrich, J. Y., Liu, L. and Zhu, Y. (2020). Differentiation of Theta Visual Motion from Fourier Motion Requires LC16 and R18C12 Neurons in Drosophila. iScience 23(4): 101041. PubMed ID: 32325414

    Jiang, L., Cheng, Y., Gao, S., Zhong, Y., Ma, C., Wang, T. and Zhu, Y. (2020). Emergence of social cluster by collective pairwise encounters in Drosophila. Elife 9. PubMed ID: 31959283

    Jiang, L., Zhan, Y. and Zhu, Y. (2018). Combining Quantitative Food-intake Assays and Forcibly Activating Neurons to Study Appetite in Drosophila. J Vis Exp(134). PubMed ID: 29757269

    Zhan, Y. P., Liu, L. and Zhu, Y. (2016). Taotie neurons regulate appetite in Drosophila. Nat Commun 7: 13633. PubMed ID: 27924813

  • Kai Zinn Division of Biology, California Institute of Technology
    Xu, S., Sergeeva, A. P., Katsamba, P. S., Mannepalli, S., Bahna, F., Bimela, J., Zipursky, S. L., Shapiro, L., Honig, B. and Zinn, K. (2022). Affinity requirements for control of synaptic targeting and neuronal cell survival by heterophilic IgSF cell adhesion molecules. Cell Rep 39(1): 110618. PubMed ID: 35385751

    Brovero, S. G., Fortier, J. C., Hu, H., Lovejoy, P. C., Newell, N. R., Palmateer, C. M., Tzeng, R. Y., Lee, P. T., Zinn, K. and Arbeitman, M. N. (2021). Investigation of Drosophila fruitless neurons that express Dpr/DIP cell adhesion molecules. Elife 10. PubMed ID: 33616528

    Menon, K. P., Kulkarni, V., Takemura, S. Y., Anaya, M. and Zinn, K. (2019). Interactions between Dpr11 and DIP-gamma control selection of amacrine neurons in Drosophila color vision circuits. Elife 8. PubMed ID: 31692445

    Ashley, J., Sorrentino, V., Lobb-Rabe, M., Nagarkar-Jaiswal, S., Tan, L., Xu, S., Xiao, Q., Zinn, K. and Carrillo, R. A. (2019). Transsynaptic interactions between IgSF proteins DIP-alpha and Dpr10 are required for motor neuron targeting specificity. Elife 8. PubMed ID: 30714906

    Al-Anzi, B. and Zinn, K. (2018). Identification and characterization of mushroom body neurons that regulate fat storage in Drosophila. Neural Dev 13(1): 18. PubMed ID: 30103787

    Carrillo, R.A., Özkan, E., Menon, K.P., Nagarkar-Jaiswal, S., Lee, P.T., Jeon, M., Birnbaum, M.E., Bellen, H.J., Garcia, K.C. and Zinn, K. (2015). Control of synaptic connectivity by a network of Drosophila IgSF cell surface proteins. Cell 163: 1770-1782. PubMed ID: 26687361

    Tan, L., Zhang, K.X., Pecot, M.Y., Nagarkar-Jaiswal, S., Lee, P.T., Takemura, S.Y., McEwen, J.M., Nern, A., Xu, S., Tadros, W., Chen, Z., Zinn, K., Bellen, H.J., Morey, M. and Zipursky, S.L. (2015). Ig superfamily ligand and receptor pairs expressed in synaptic partners in Drosophila. Cell 163: 1756-1769. PubMed ID: 26687360

    Menon, K.P., Carrillo, R.A. and Zinn, K. (2015). The translational regulator Cup controls NMJ presynaptic terminal morphology. Mol Cell Neurosci [Epub ahead of print]. PubMed ID: 26102195

    Jeon, M. and Zinn, K. (2014). R3 receptor tyrosine phosphatases: Conserved regulators of receptor tyrosine kinase signaling and tubular organ development. Semin Cell Dev Biol. PubMed ID: 25242281

    Menon, K. P., Carrillo, R. A. and Zinn, K. (2013). Development and plasticity of the Drosophila larval neuromuscular junction. Wiley Interdiscip Rev Dev Biol 2: 647-670. PubMed ID: 24014452

    Lee, H. K., Cording, A., Vielmetter, J. and Zinn, K. (2013). Interactions between a Receptor Tyrosine Phosphatase and a Cell Surface Ligand Regulate Axon Guidance and Glial-Neuronal Communication. Neuron 78: 813-826. PubMed ID: 23764287

    Jeon, M., Scott, M. P. and Zinn, K. (2012). Interactions between Type III receptor tyrosine phosphatases and growth factor receptor tyrosine kinases regulate tracheal tube formation in Drosophila. Biol. Open 1(6): 548-58. PubMed ID: 23213447

  • Konrad Zinsmaier Department of Neuroscience, University of Arizona Tucson
    Imler, E., Pyon, J. S., Kindelay, S., Torvund, M., Zhang, Y. Q., Chandra, S. S. and Zinsmaier, K. E. (2019). A Drosophila model of neuronal ceroid lipofuscinosis CLN4 reveals a hypermorphic gain of function mechanism. Elife 8. PubMed ID: 31663851

    Patron, L. A., Nagatomo, K., Eves, D. T., Imad, M., Young, K., Torvund, M., Guo, X., Rogers, G. C. and Zinsmaier, K. E. (2019). Cul4 ubiquitin ligase cofactor DCAF12 promotes neurotransmitter release and homeostatic plasticity. J Cell Biol 218(3): 993-1010. PubMed ID: 30670470

    Patron, L. A., Nagatomo, K., Eves, D. T., Imad, M., Young, K., Torvund, M., Guo, X., Rogers, G. C. and Zinsmaier, K. E. (2019). Cul4 ubiquitin ligase cofactor DCAF12 promotes neurotransmitter release and homeostatic plasticity. J Cell Biol. PubMed ID: 30670470

    Babic, M., Russo, G. J., Wellington, A. J., Sangston, R. M., Gonzalez, M. and Zinsmaier, K. E. (2015). Miro's N-Terminal GTPase Domain Is Required for Transport of Mitochondria into Axons and Dendrites. J Neurosci 35: 5754-5771. PubMed ID: 25855186

    Tsai, P. I., Course, M. M., Lovas, J. R., Hsieh, C. H., Babic, M., Zinsmaier, K. E. and Wang, X. (2014). PINK1-mediated phosphorylation of Miro inhibits synaptic growth and protects dopaminergic neurons in Drosophila. Sci Rep 4: 6962. PubMed ID: 25376463

    Liu, Y. C., Pearce, M. W., Honda, T., Johnson, T. K., Charlu, S., Sharma, K. R., Imad, M., Burke, R. E., Zinsmaier, K. E., Ray, A., Dahanukar, A., de Bruyne, M. and Warr, C. G. (2014). The Drosophila melanogaster phospholipid flippase dATP8B is required for odorant receptor function. PLoS Genet 10: e1004209. PubMed ID: 24651716

  • Larry Zipursky Department of Biological Chemistry, UCLA
    Dombrovski, M., Peek, M. Y., Park, J. Y., Vaccari, A., Sumathipala, M., Morrow, C., Breads, P., Zhao, A., Kurmangaliyev, Y. Z., Sanfilippo, P., Rehan, A., Polsky, J., Alghailani, S., Tenshaw, E., Namiki, S., Zipursky, S. L. and Card, G. M. (2023). Synaptic gradients transform object location to action. Nature 613(7944): 534-542. PubMed ID: 36599984

    Kurmangaliyev, Y. Z., Yoo, J., Valdes-Aleman, J., Sanfilippo, P. and Zipursky, S. L. (2020). Transcriptional Programs of Circuit Assembly in the Drosophila Visual System. Neuron. PubMed ID: 33125872

    Kurmangaliyev, Y. Z., Yoo, J., LoCascio, S. A. and Zipursky, S. L. (2019). Modular transcriptional programs separately define axon and dendrite connectivity. Elife 8. PubMed ID: 31687928

    Akin, O., Bajar, B. T., Keles, M. F., Frye, M. A. and Zipursky, S. L. (2019). Cell-type-specific patterned stimulus-independent neuronal activity in the Drosophila visual system during synapse formation. Neuron 101(5): 894-904.e895. PubMed ID: 30711355

    Cosmanescu, F., Katsamba, P. S., Sergeeva, A. P., Ahlsen, G., Patel, S. D., Brewer, J. J., Tan, L., Xu, S., Xiao, Q., Nagarkar-Jaiswal, S., Nern, A., Bellen, H. J., Zipursky, S. L., Honig, B. and Shapiro, L. (2018). Neuron-subtype-specific expression, interaction affinities, and specificity determinants of DIP/Dpr cell recognition proteins. Neuron. PubMed ID: 30467080

    Akin, O. and Zipursky, S. L. (2016). Frazzled promotes growth cone attachment at the source of a Netrin gradient in the Drosophila visual system. Elife 5. PubMed ID: 27743477

    Zhang, K. X., Tan, L., Pellegrini, M., Zipursky, S. L. and McEwen, J. M. (2016). Rapid changes in the translatome during the conversion of growth cones to synaptic terminals. Cell Rep 14: 1258-1271. PubMed ID: 26832407

    Tadros, W., Xu, S., Akin, O., Yi, C. H., Shin, G. J., Millard, S. S. and Zipursky, S. L. (2016). Dscam proteins direct dendritic targeting through adhesion. Neuron 89: 480-493. PubMed ID: 26844831

    Tan, L., Zhang, K.X., Pecot, M.Y., Nagarkar-Jaiswal, S., Lee, P.T., Takemura, S.Y., McEwen, J.M., Nern, A., Xu, S., Tadros, W., Chen, Z., Zinn, K., Bellen, H.J., Morey, M. and Zipursky, S.L. (2015). Ig superfamily ligand and receptor pairs expressed in synaptic partners in Drosophila. Cell 163: 1756-1769. PubMed ID: 26687360

    Pecot, M. Y., Chen, Y., Akin, O., Chen, Z., Tsui, C. Y. and Zipursky, S. L. (2014). Sequential axon-derived signals couple target survival and layer specificity in the Drosophila visual system. Neuron 82: 320-333. PubMed ID: 24742459

  • Marta Zlatic Janelia Farm Research Campus
    Eschbach, C., Fushiki, A., Winding, M., Afonso, B., Andrade, I. V., Cocanougher, B. T., Eichler, K., Gepner, R., Si, G., Valdes-Aleman, J., Fetter, R. D., Gershow, M., Jefferis, G. S., Samuel, A. D., Truman, J. W., Cardona, A. and Zlatic, M. (2021). Circuits for integrating learned and innate valences in the insect brain. Elife 10. PubMed ID: 34755599

    Valdes-Aleman, J., Fetter, R. D., Sales, E. C., Heckman, E. L., Venkatasubramanian, L., Doe, C. Q., Landgraf, M., Cardona, A. and Zlatic, M. (2020). Comparative Connectomics Reveals How Partner Identity, Location, and Activity Specify Synaptic Connectivity in Drosophila. Neuron. PubMed ID: 33120017

    Eschbach, C., Fushiki, A., Winding, M., Schneider-Mizell, C. M., Shao, M., Arruda, R., Eichler, K., Valdes-Aleman, J., Ohyama, T., Thum, A. S., Gerber, B., Fetter, R. D., Truman, J. W., Litwin-Kumar, A., Cardona, A. and Zlatic, M. (2020). Recurrent architecture for adaptive regulation of learning in the insect brain. Nat Neurosci 23(4): 544-555. PubMed ID: 32203499

    Masson, J. B., Laurent, F., Cardona, A., Barre, C., Skatchkovsky, N., Zlatic, M. and Jovanic, T. (2020). Identifying neural substrates of competitive interactions and sequence transitions during mechanosensory responses in Drosophila. PLoS Genet 16(2): e1008589. PubMed ID: 32059010

    Jovanic, T., Winding, M., Cardona, A., Truman, J. W., Gershow, M. and Zlatic, M. (2019). Neural substrates of Drosophila larval anemotaxis. Curr Biol. PubMed ID: 30744969

    Tastekin, I., Khandelwal, A., Tadres, D., Fessner, N. D., Truman, J. W., Zlatic, M., Cardona, A. and Louis, M. (2018). Sensorimotor pathway controlling stopping behavior during chemotaxis in the Drosophila melanogaster larva. Elife 7. PubMed ID: 30465650

    Burgos, A., Honjo, K., Ohyama, T., Qian, C. S., Shin, G. J., Gohl, D. M., Silies, M., Tracey, W. D., Zlatic, M., Cardona, A. and Grueber, W. B. (2018). Nociceptive interneurons control modular motor pathways to promote escape behavior in Drosophila. Elife 7. PubMed ID: 29528286

    Takagi, S., Cocanougher, B. T., Niki, S., Miyamoto, D., Kohsaka, H., Kazama, H., Fetter, R. D., Truman, J. W., Zlatic, M., Cardona, A. and Nose, A. (2017). Divergent connectivity of homologous command-like neurons mediates segment-specific touch responses in Drosophila. Neuron 96(6): 1373-1387.e1376. PubMed ID: 29198754

    Eichler, K., Li, F., Litwin-Kumar, A., Park, Y., Andrade, I., Schneider-Mizell, C. M., Saumweber, T., Huser, A., Eschbach, C., Gerber, B., Fetter, R. D., Truman, J. W., Priebe, C. E., Abbott, L. F., Thum, A. S., Zlatic, M. and Cardona, A. (2017). The complete connectome of a learning and memory centre in an insect brain. Nature 548(7666): 175-182. PubMed ID: 28796202

    Almeida-Carvalho, M. J., Berh, D., Braun, A., Chen, Y. C., Eichler, K., Eschbach, C., Fritsch, P. M. J., Gerber, B., Hoyer, N., Jiang, X., Kleber, J., Klambt, C., Konig, C., Louis, M., Michels, B., Miroschnikow, A., Mirth, C., Miura, D., Niewalda, T., Otto, N., Paisios, E., Pankratz, M. J., Petersen, M., Ramsperger, N., Randel, N., Risse, B., Saumweber, T., Schlegel, P., Schleyer, M., Soba, P., Sprecher, S. G., Tanimura, T., Thum, A. S., Toshima, N., Truman, J. W., Yarali, A. and Zlatic, M. (2017). The Ol1mpiad: concordance of behavioural faculties of stage 1 and stage 3 Drosophila larvae. J Exp Biol 220(Pt 13): 2452-2475. PubMed ID: 28679796

  • Mauro Agostino Zordan Department of Biology, Università di Padova, Italy
    Meda, N., Menti, G. M., Megighian, A. and Zordan, M. A. (2021). A heuristic underlies the search for relief in Drosophila melanogaster. Ann N Y Acad Sci. PubMed ID: 34928521

    Meda, N., Frighetto, G., Megighian, A. and Zordan, M. A. (2020). Searching for relief: Drosophila melanogaster navigation in a virtual bitter maze. Behav Brain Res: 112616. PubMed ID: 32361039

    Frighetto, G., Zordan, M. A., Castiello, U. and Megighian, A. (2019). Action-based attention in Drosophila melanogaster. J Neurophysiol 121(6): 2428-2432. PubMed ID: 31042449

    Da-Re, C., von Stockum, S., Biscontin, A., Millino, C., Cisotto, P., Zordan, M. A., Zeviani, M., Bernardi, P., De Pitta, C. and Costa, R. (2014). Leigh syndrome in Drosophila melanogaster: morphological and biochemical characterization of Surf1 post-transcriptional silencing. J Biol Chem 289(42): 29235-29246. PubMed ID: 25164807

  • Mario Enrique Zurita Departamento de Fisiología Molecular y Genética del Desarrollo, Instituto de Biotecnología-Universidad Nacional Autónoma de México, Cuernavaca, Morelos, México.
    Bucio-Mendez, A., Cruz-Becerra, G., Valadez-Graham, V., Dinkova, T. D. and Zurita, M. (2018). The Dmp8-Dmp18 bicistron messenger RNA enables unusual translation during cellular stress. J Cell Biochem. PubMed ID: 30270456

    Cruz-Becerra, G., Valerio-Cabrera, S., Juarez, M., Bucio-Mendez, A. and Zurita, M. (2018). TFIIH is highly dynamic during zygotic genome activation in Drosophila and its depletion causes catastrophic mitosis. J Cell Sci. PubMed ID: 29643118

    Cruz-Becerra, G., Juarez, M., Valadez-Graham, V. and Zurita, M. (2016). Analysis of Drosophila p8 and p52 mutants reveals distinct roles for the maintenance of TFIIH stability and male germ cell differentiation. Open Biol 6. PubMed ID: 27805905

    Monribot-Villanueva, J., Juarez-Uribe, R. A., Palomera-Sanchez, Z., Gutierrez-Aguiar, L., Zurita, M., Kennison, J. A., Vazquez, M. (2013) TnaA, an SP-RING Protein, Interacts with Osa, a Subunit of the Chromatin Remodeling Complex BRAHMA and with the SUMOylation Pathway in Drosophila melanogaster. PLoS One 8: e62251. PubMed ID: 23620817

    Villicana, C., Cruz, G., Zurita, M. (2013) The genetic depletion or the triptolide inhibition of TFIIH in p53 deficient cells induce a JNK-dependent cell death in Drosophila. J Cell Sci. PubMed ID: 23549790

    Herrera-Cruz, M., Cruz, G., Valadez-Graham, V., Fregoso-Lomas, M., Villicana, C., Vazquez, M., Reynaud, E. and Zurita, M. (2012). Physical and functional interactions between Drosophila homologue of Swc6/p18Hamlet subunit of the SWR1/SRCAP chromatin-remodeling complex with the DNA repair/transcription factor TFIIH. J Biol Chem 287: 33567-33580. PubMed ID: 22865882

    Yoshioka, Y., Nguyen, T. T., Fujiwara, S., Matsuda, R., Valadez-Graham, V., Zurita, M. and Yamaguchi, M. (2012). Drosophila DREF acting via the JNK pathway is required for thorax development. Genesis 50: 599-611. PubMed ID: 22307950

    Hernandez-Vargas, R., Fonseca-Ornelas, L., Lopez-Gonzalez, I., Riesgo-Escovar, J., Zurita, M. and Reynaud, E. (2011). Synphilin suppresses alpha-synuclein neurotoxicity in a Parkinson's disease Drosophila model. Genesis 49: 392-402. PubMed ID: 21584925

  • Michal Zurovec Institute of Entomology, University of South Bohemia in Ceske Budejovice, Czech Republic
    Lin, Y. H., Maaroufi, H. O., Kucerova, L., Rouhova, L., Filip, T. and Zurovec, M. (2021). Adenosine Receptor and Its Downstream Targets, Mod(mdg4) and Hsp70, Work as a Signaling Pathway Modulating Cytotoxic Damage in Drosophila. Front Cell Dev Biol 9: 651367. PubMed ID: 33777958

    Lin, Y. H., Maaroufi, H. O., Ibrahim, E., Kucerova, L. and Zurovec, M. (2019). Expression of human mutant Huntingtin protein in Drosophila hemocytes impairs immune responses. Front Immunol 10: 2405. PubMed ID: 31681295

    Broz, V., Kucerova, L., Rouhova, L., Fleischmannova, J., Strnad, H., Bryant, P. J. and Zurovec, M. (2017). Drosophila imaginal disc growth factor 2 is a trophic factor involved in energy balance, detoxification, and innate immunity. Sci Rep 7: 43273. PubMed ID: 28230183

    Sajwan, S., Sidorov, R., Staskova, T., Zaloudikova, A., Takasu, Y., Kodrik, D. and Zurovec, M. (2015). Targeted mutagenesis and functional analysis of adipokinetic hormone-encoding gene in Drosophila. Insect Biochem Mol Biol [Epub ahead of print]. PubMed ID: 25641265

    Sidorov, R., Kucerova, L., Kiss, I. and Zurovec, M. (2014). Mutation in the Drosophila melanogaster adenosine receptor gene selectively decreases the mosaic hyperplastic epithelial outgrowth rates in wts or dco heterozygous flies. Purinergic Signal [Epub ahead of print]. PubMed ID: 25528157

    Arefin, B., Kucerova, L., Dobes, P., Markus, R., Strnad, H., Wang, Z., Hyrsl, P., Zurovec, M. and Theopold, U. (2014). Genome-wide transcriptional analysis of Drosophila larvae infected by entomopathogenic nematodes shows involvement of complement, recognition and extracellular matrix proteins. J Innate Immun 6: 192-204. PubMed ID: 23988573

    Kiss, B., Szlanka, T., Zvara, A., Zurovec, M., Sery, M., Kakas, S., Ramasz, B., Hegedus, Z., Lukacsovich, T., Puskas, L., Fonagy, A. and Kiss, I. (2013). Selective elimination/RNAi silencing of FMRF-related peptides and their receptors decreases the locomotor activity in Drosophila melanogaster. Gen Comp Endocrinol 191: 137-145. PubMed ID: 23770020

    Kucerova, L., Broz, V., Fleischmannova, J., Santruckova, E., Sidorov, R., Dolezal, V. and Zurovec, M. (2012). Characterization of the Drosophila adenosine receptor: the effect of adenosine analogs on cAMP signaling in Drosophila cells and their utility for in vivo experiments. J Neurochem 121: 383-395. PubMed ID: 22353178



  • This listing of Fly Labs and References is a work in progress. Please contact Tom Brody ([email protected]) with your suggestions or corrections.

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