bicoid
See the embryonic expression pattern of bcd at the Berkeley Drosophila Genome Project Patterns of Gene Expression Site
Localization of maternally provided RNAs during oogenesis is required for formation of the
antero-posterior axis of the Drosophila embryo. This paper describes a subcellular structure in nurse cells
and oocytes that may function as an intracellular compartment for assembly and transport of
maternal products involved in RNA localization. This structure, termed a "sponge body,"
consists of ER-like cisternae, embedded in an amorphous electron-dense mass. It lacks a surrounding
membrane and is frequently associated with mitochondria. Sponge bodies are not identical to the
Golgi complexes. It is suggested that the sponge bodies are homologous to the mitochondrial cloud in
Xenopus oocytes, a granulo-fibrillar structure that contains RNAs involved in patterning of the embryo.
Exuperantia protein, the earliest factor known to be required for the localization of Bicoid mRNA to the
anterior pole of the Drosophila oocyte, is highly enriched in the sponge bodies but not an essential
structural component of these. RNA staining indicates that sponge bodies contain RNA. However,
neither the intensity of this staining nor the accumulation of Exuperantia in the sponge bodies is
dependent on the amount of Bicoid mRNA present in the ovaries. Sponge bodies surround nuage, a
possible polar granule precursor. Microtubules and microfilaments are not present in sponge bodies,
although transport of the sponge bodies through the cells is implied by their presence in cytoplasmic
bridges. It is proposed that the sponge bodies are structures that are involved in localization of mRNAs in Drosophila oocytes by means of the assembly and transport of included
molecules or associated structures (Wilsch-Bräuninger, 1997).
Earliest zygotic translation of the Bicoid mRNA is detected immediately after fertilization and egg deposition (stage 1). The anterior-posterior gradient of Bicoid is immediately apparent. The level increases slightly until onset of cellularization and decreases more rapidly during gastrulation [Images]. Traces are still apparent at the end of germ band elongation (Driever, 1988). In embryos from females with a mutation in bicoid, head and thorax are lacking and replaced by a posterior telson (Fröhnhofer, 1986).
Embryos lacking both maternal and zygotic hb display a reduction
and an anterior shift of ems and btd expression at the blastoderm stage. Thus, it has been proposed that head-specific ems
expression at the blastoderm stage requires synergistic activation
by bcd and hb. However, no hb consensus site could be detected within the 304 bp enhancer element. It cannot be excluded that hb binding sites exist in the ems enhancer outside this element. However, the results suggest that hb plays a relatively minor role in ems expression control in the head and brain (Hartmann, 2002).
Drosophila segmentation is governed by a well-defined gene regulation network. The evolution of this network was investigated by examining the expression profiles of a complete set of segmentation genes in the early embryos of the mosquito, Anopheles gambiae. There are numerous differences in the expression profiles as compared with Drosophila. The germline determinant Oskar is expressed in both the anterior and posterior poles of Anopheles embryos but is strictly localized within the posterior plasm of Drosophila. The gap genes hunchback and giant display inverted patterns of expression in posterior regions of Anopheles embryos, while tailless exhibits an expanded pattern as compared with Drosophila. These observations suggest that the segmentation network has undergone considerable evolutionary change in the dipterans and that similar patterns of pair-rule gene expression can be obtained with different combinations of gap repressors. The evolution of separate stripe enhancers in the eve loci of different dipterans is discussed (Goltsev, 2004).
Anopheles lacks bicoid and contains a lone Hox3 gene that is more closely related to zen and specifically expressed in the serosa. How is hunchback activated in the presumptive head and thorax in Anopheles? The homeobox gene orthodenticle can substitute for bicoid in Tribolium. However, orthodenticle does not appear to be maternally expressed in Anopheles, but instead, staining is strictly zygotic and restricted to anterior regions, similar to the pattern seen in Drosophila. Sequential patterns of orthodenticle, giant, and hunchback expression are established by differential threshold readouts of the Bicoid gradient in Drosophila. It is possible that an unknown maternal regulatory gradient emanating from the anterior pole is responsible for producing similar patterns of expression in Anopheles. It is proposed that this unknown regulatory factor may be localized to the anterior pole by Oskar. Oskar coordinates the assembly of polar granules and is essential for the localization of Nanos in the posterior plasm. It might also localize one or more unknown determinants in anterior regions of Anopheles embryos (Goltsev, 2004).
The eve stripe 2 enhancer is the most thoroughly characterized enhancer in the segmentation gene network. It can be activated throughout the anterior half of the embryo by Bicoid and Hunchback, but the Giant and Kruppel repressors delimit the pattern and establish the anterior and posterior stripe borders, respectively. Removal of the Giant repressor sites within the stripe 2 enhancer in cis or removal of the repressor in trans causes an anterior expansion of the stripe 2 pattern. However, ectopic expression does not extend to the anterior pole, suggesting that an additional anterior repressor regulates the stripe 2 enhancer. Recent studies identified Sloppy-paired as the likely anterior repressor. The limits of the giant and Kruppel expression patterns seen in Anopheles suggest that they might define the eve stripe 2 borders, just as in Drosophila. However, at the critical time when eve stripe 2 is formed in Anopheles, the giant staining pattern extends to the anterior pole, while the corresponding Drosophila gene is repressed in these regions. It is therefore possible that Giant is sufficient to form the anterior border in Anopheles and that repression by Sloppy-paired represents an innovation in Drosophila (Goltsev, 2004).
Why do some enhancers generate two stripes, while others direct just one? Consider the eve stripe 2 and stripe 3/7 enhancers in Drosophila. The stripe 3/7 enhancer is activated by ubiquitous activators, including dSTAT, and the two stripes are 'carved out' by the localized Hunchback and Knirps repressors. Knirps establishes the posterior border of stripe 3 and anterior border of stripe 7, while Hunchback establishes the anterior border of stripe 3 and posterior border of stripe 7. The stripe 2 enhancer directs just a single stripe due to the localized distribution of the stripe 2 activators, particularly Bicoid. In principle, a ubiquitous activator would cause the stripe 2 enhancer to direct two stripes, stripes 2 and 5. Opposing Giant and Kruppel repressor gradients would carve out the borders of the two stripes, similar to the way in which Hunchback and Knirps regulate the stripe 3/7 and stripe 4/6 enhancers. Presumably, the eve stripe 5 enhancer directs a single stripe of expression because it is regulated by a localized activator, possibly Caudal (Goltsev, 2004).
Patterning in multicellular organisms results from spatial gradients in morphogen concentration, but the dynamics of these gradients remain largely unexplored. This study characterized, through in vivo optical imaging, the development and stability of the Bicoid morphogen gradient in Drosophila embryos that express a Bicoid-eGFP fusion protein. The gradient is established rapidly (1 hr after fertilization), with nuclear Bicoid concentration rising and falling during mitosis. Interphase levels result from a rapid equilibrium between Bicoid uptake and removal. Initial interphase concentration in nuclei in successive cycles is constant (+-10%), demonstrating a form of gradient stability, but it subsequently decays by approximately 30%. Both direct photobleaching measurements and indirect estimates of Bicoid-eGFP diffusion constants (D <=1 microm2/s) provide a consistent picture of Bicoid transport on short (min) time scales but challenge traditional models of long-range gradient formation. A new model is presented emphasizing the possible role of nuclear dynamics in shaping and scaling the gradient (Gregor, 2007a).
The principal results provide the following foundation for any mechanistic model for the formation or read out of the Bcd gradient:
Earlier work established that molecular motion in the embryo is described well by the diffusion equation on the time (1 hr) and space scales of relevance for morphogenesis. The present work shows that diffusion is an equally good description of Bicoid transport on the scale of minutes and microns. The difficulty is that the relevant diffusion constants differ by more than an order of magnitude. To explain the observation that the Bcd gradient reaches a nuclear steady state very quickly the larger diffusion constants are needed, but the dynamics of transport into and out of the nuclei are consistent with the smaller diffusion constant, which were also measured directly. New experiments will be required to decide which of these is correct (Gregor, 2007a).
The most dramatic qualitative feature that is see in watching the development of the embryos expressing Bcd-GFP is the filling and emptying of the nuclei. Quantitatively, this results in a startling juxtaposition of dynamics and stability. Thus, although Bcd concentrations vary in time over a factor of four during the course of a mitotic cycle, the nuclear concentration near the start of interphase is reproducible with 10% accuracy from cycle to cycle. Although the number of nuclei is changing by a factor of 16 from cycle 10 to cycle 14, the total number of Bcd molecules that are localized in nuclei changes hardly at all. At the present level of understanding, both these examples of stability in the presence of change seem to be the result of cancellation among several independent processes, which is implausible. One way of summarizing the problem is that the simplest model looks like it works, but this is only because many parameters have been adjusted to make it work, leaving the simplest model as an effective description of the dynamics after the mechanisms responsible for this adjustment have done their job. This layer of mechanisms remains to be discovered (Gregor, 2007a).
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bicoid:
Biological Overview
| Evolutionary Homologs
| Regulation
| Targets of Activity
| Protein Interactions
| Miscellaneous Interactions
| Developmental Biology
| Effects of Mutation
date revised: 25 June 2009
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