Fly Labs and References


A B C D E F G H I J K L M N O P Q R S T U V W X Y Z


  • Anja Nagel Institute of Genetics, University of Hohenheim, Stuttgart
    Wolf, D. B., Maier, D. and Nagel, A. C. (2021). Nucleo-cytoplasmic shuttling of murine RBPJ by Hairless protein matches that of Su(H) protein in the model system Drosophila melanogaster. Hereditas 158(1): 11. PubMed ID: 33775255

    Frankenreiter, L., Gahr, B. M., Schmid, H., Zimmermann, M., Deichsel, S., Hoffmeister, P., Turkiewicz, A., Borggrefe, T., Oswald, F. and Nagel, A. C. (2021). Phospho-Site Mutations in Transcription Factor Suppressor of Hairless Impact Notch Signaling Activity During Hematopoiesis in Drosophila. Front Cell Dev Biol 9: 658820. PubMed ID: 33937259

    Gahr, B. M., Brandle, F., Zimmermann, M. and Nagel, A. C. (2019). An RBPJ-Drosophila model reveals dependence of RBPJ protein stability on the formation of transcription-regulator complexes. Cells 8(10). PubMed ID: 31615108

    Kober, L., Zimmermann, M., Kurz, M., Bayer, M. and Nagel, A. C. (2019). Loss of putzig in the germline impedes germ cell development by inducing cell death and new niche like microenvironments. Sci Rep 9(1): 9108. PubMed ID: 31235815

    Bayer, F. E., Zimmermann, M., Preiss, A. and Nagel, A. C. (2018). Overexpression of the Drosophila ATR homologous checkpoint kinase Mei-41 induces a G2/M checkpoint in Drosophila imaginal tissue. Hereditas 155: 27. PubMed ID: 30202398

    Bayer, F. E., Zimmermann, M., Fischer, P., Gromoll, C., Preiss, A. and Nagel, A. C. (2017). p53 and cyclin G cooperate in mediating genome stability in somatic cells of Drosophila. Sci Rep 7(1): 17890. PubMed ID: 29263364

    Fischer, P., Preiss, A. and Nagel, A. C. (2016). A triangular connection between Cyclin G, PP2A and Akt1 in the regulation of growth and metabolism in Drosophila. Fly (Austin): [Epub ahead of print]. PubMed ID: 26980713

    Fischer, P., La Rosa, M.K., Schulz, A., Preiss, A. and Nagel, A.C. (2015). Cyclin G functions as a positive regulator of growth and metabolism in Drosophila. PLoS Genet 11: e1005440. PubMed ID: 26274446

    Zimmermann, M., Kugler, S.J., Schulz, A. and Nagel, A.C. (2015). Loss of putzig activity results in apoptosis during wing imaginal development in Drosophila. PLoS One 10: e0124652. PubMed ID: 25894556

  • Kathy Nagel NYU Medical School
    Alvarez-Salvado, E., Licata, A. M., Connor, E. G., McHugh, M. K., King, B. M., Stavropoulos, N., Victor, J. D., Crimaldi, J. P. and Nagel, K. I. (2018). Elementary sensory-motor transformations underlying olfactory navigation in walking fruit-flies. Elife 7. PubMed ID: 30129438

    Fulterer, A., Andlauer, T. F. M., Ender, A., Maglione, M., Eyring, K., Woitkuhn, J., Lehmann, M., Matkovic-Rachid, T., Geiger, J. R. P., Walter, A. M., Nagel, K. I. and Sigrist, S. J. (2018). Active Zone Scaffold Protein Ratios Tune Functional Diversity across Brain Synapses. Cell Rep 23(5): 1259-1274. PubMed ID: 29719243

    Nagel, K. I. and Wilson, R. I. (2016). Mechanisms Underlying Population Response Dynamics in Inhibitory Interneurons of the Drosophila Antennal Lobe. J Neurosci 36(15): 4325-4338. PubMed ID: 27076428

    Gaudry, Q., Nagel, K. I. and Wilson, R. I. (2012). Smelling on the fly: sensory cues and strategies for olfactory navigation in Drosophila. Curr Opin Neurobiol 22(2): 216-222. PubMed ID: 22221864


  • Emi Nagoshi Department of Genetics and Evolution, Sciences III, University of Geneva
    Miozzo, F., Valencia-Alarcon, E. P., Stickley, L., Majcin Dorcikova, M., Petrelli, F., Tas, D., Loncle, N., Nikonenko, I., Bou Dib, P. and Nagoshi, E. (2022). Maintenance of mitochondrial integrity in midbrain dopaminergic neurons governed by a conserved developmental transcription factor. Nat Commun 13(1): 1426. PubMed ID: 35301315

    Almeida, M. P., Lago Solis, B., Stickley, L., Feidler, A. and Nagoshi, E. (2021). Neurofibromin 1 in mushroom body neurons mediates circadian wake drive through activating cAMP-PKA signaling. Nat Commun 12(1): 5758. PubMed ID: 34599173

    Kozlov, A., Koch, R. and Nagoshi, E. (2020). Nitric oxide mediates neuro-glial interaction that shapes Drosophila circadian behavior. PLoS Genet 16(6): e1008312. PubMed ID: 32598344

    Sabado, V., Vienne, L. and Nagoshi, E. (2017). Evaluating the autonomy of the Drosophila circadian clock in dissociated neuronal culture. Front Cell Neurosci 11: 317. PubMed ID: 29075180

    Kozlov, A., Jaumouille, E., Machado Almeida, P., Koch, R., Rodriguez, J., Abruzzi, K. C. and Nagoshi, E. (2017). A screening of UNF targets identifies Rnb, a novel regulator of Drosophila circadian rhythms. J Neurosci. PubMed ID: 28592698

    Sabado, V., Vienne, L., Nunes, J. M., Rosbash, M. and Nagoshi, E. (2017). Fluorescence circadian imaging reveals a PDF-dependent transcriptional regulation of the Drosophila molecular clock. Sci Rep 7: 41560. PubMed ID: 28134281

    Jaumouille, E., Machado Almeida, P., Stahli, P., Koch, R. and Nagoshi, E. (2015). Transcriptional Regulation via Nuclear Receptor Crosstalk Required for the Drosophila Circadian Clock. Curr Biol 25: 1502-1508. PubMed ID: 26004759

    Abruzzi, K., Chen, X., Nagoshi, E., Zadina, A. and Rosbash, M. (2015). RNA-seq profiling of small numbers of Drosophila neurons. Methods Enzymol 551: 369-386. PubMed ID: 25662465

    Beuchle, D., Jaumouille, E. and Nagoshi, E. (2012). The nuclear receptor unfulfilled is required for free-running clocks in Drosophila pacemaker neurons. Curr Biol 22: 1221-1227. PubMed ID: 22658597

  • Nirmala Naidoo Center for Sleep and Circadian Neurobiology, University of Pennsylvania
    Ly, S., Lee, D. A., Strus, E., Prober, D. A. and Naidoo, N. (2020). Evolutionarily Conserved Regulation of Sleep by the Protein Translational Regulator PERK. Curr Biol. PubMed ID: 32169212

    Ly, S., Strus, E. and Naidoo, N. (2019). Genetic disruption of the putative binding site for Homer on DmGluRA reduces sleep in Drosophila. Sleep. PubMed ID: 31418019

    Ly, S. and Naidoo, N. (2019). Loss of DmGluRA exacerbates age-related sleep disruption and reduces lifespan. Neurobiol Aging 80: 83-90. PubMed ID: 31103635

    Brown, M. K., Chan, M. T., Zimmerman, J. E., Pack, A. I., Jackson, N. E. and Naidoo, N. (2013). Aging induced endoplasmic reticulum stress alters sleep and sleep homeostasis. Neurobiol Aging. PubMed ID: 24444805

    Naidoo, N., Ferber, M., Galante, R. J., McShane, B., Hu, J. H., Zimmerman, J., Maislin, G., Cater, J., Wyner, A., Worley, P. and Pack, A. I. (2012). Role of Homer proteins in the maintenance of sleep-wake states. PLoS One 7: e35174. PubMed ID: 22532843

  • Akira Nakamura Riken Center for Developmental Biology, Kobe, Japan
    Tanaka, T., Tani, N. and Nakamura, A. (2021). Receptor-mediated yolk uptake is required for oskar mRNA localization and cortical anchorage of germ plasm components in the Drosophila oocyte. PLoS Biol 19(4): e3001183. PubMed ID: 33891588

    Asaoka, M., Hanyu-Nakamura, K., Nakamura, A. and Kobayashi, S. (2019). Maternal Nanos inhibits Importin-alpha2/Pendulin-dependent nuclear import to prevent somatic gene expression in the Drosophila germline. PLoS Genet 15(5): e1008090. PubMed ID: 30890569

  • Yoshinobu Nakanishi Faculty of Pharmacy, Institute of Medical, Pharmaceutical and Health Sciences, Kanazawa University
    Zhang, M., Nagaosa, K., Nakai, Y., Yasugi, T., Kushihiki, M., Rahmatika, D., Sato, M., Shiratsuchi, A. and Nakanishi, Y. (2020). Role for phagocytosis in the prevention of neoplastic transformation in Drosophila. Genes Cells. PubMed ID: 32865275

    Shiratsuchi, A., Nitta, M., Kuroda, A., Komiyama, C., Gawasawa, M., Shimamoto, N., Tuan, T. Q., Morita, T., Aiba, H. and Nakanishi, Y. (2016). Inhibition of phagocytic killing of Escherichia coli in Drosophila hemocytes by RNA chaperone Hfq. J Immunol [Epub ahead of print]. PubMed ID: 27357148

    Tung, T. T., Nagaosa, K., Fujita, Y., Kita, A., Mori, H., Okada, R., Nonaka, S., Nakanishi, Y. (2013) Phosphatidylserine recognition and induction of apoptotic cell clearance by Drosophila engulfment receptor Draper. J Biochem. PubMed ID: 23420848

    Nonaka, S., Nagaosa, K., Mori, T., Shiratsuchi, A., Nakanishi, Y. (2013) Integrin alphaPS3/betanu-Mediated Phagocytosis of Apoptotic Cells and Bacteria in Drosophila. J Biol Chem. PubMed ID: 23426364

    Fujita, Y., Nagaosa, K., Shiratsuchi, A., Nakanishi, Y. (2012) Role of NPxY motif in Draper-mediated apoptotic cell clearance in Drosophila. Drug Discov Ther 6: 291-297. PubMed ID: 23337816

    Shiratsuchi, A., Mori, T., Sakurai, K., Nagaosa, K., Sekimizu, K., Lee, B. L. and Nakanishi, Y. (2012). Independent recognition of Staphylococcus aureus by two receptors for phagocytosis in Drosophila. J Biol Chem 287: 21663-21672. PubMed ID: 22547074

    Okada, R., Nagaosa, K., Kuraishi, T., Nakayama, H., Yamamoto, N., Nakagawa, Y., Dohmae, N., Shiratsuchi, A. and Nakanishi, Y. (2012). Apoptosis-dependent externalization and involvement in apoptotic cell clearance of DmCaBP1, an endoplasmic reticulum protein of Drosophila. J Biol Chem 287: 3138-3146. PubMed ID: 22158613

  • Hiroshi Nakato Department of Genetics, Cell Biology and Development, Minneapolis
    Takemura, M., Lu, Y. S., Nakato, E. and Nakato, H. (2021). Endogenous epitope tagging of a JAK/STAT ligand Unpaired1 in Drosophila. MicroPubl Biol 2021. PubMed ID: 34651105

    Takemura, M., Bowden, N., Lu, Y. S., Nakato, E., O'Connor, M. B. and Nakato, H. (2021). Drosophila MOV10 regulates the termination of midgut regeneration. Genetics. PubMed ID: 33693718

    Takemura, M., Noborn, F., Nilsson, J., Bowden, N., Nakato, E., Baker, S., Su, T. Y., Larson, G. and Nakato, H. (2020). Chondroitin sulfate proteoglycan Windpipe modulates Hedgehog signaling in Drosophila. Mol Biol Cell: mbcE19060327. PubMed ID: 32049582

    Kanai, M. I., Kim, M. J., Akiyama, T., Takemura, M.,wgue of the vertebrate LIM domain only protein, is a novel regulator of crystal cell development in Drosophila melanogaster. J Genet 98. PubMed ID: 31819023

    Kairamkonda, S. and Nongthomba, U. (2018). Beadex, a Drosophila LIM domain only protein, function in follicle cells is essential for egg development and fertility. Exp Cell Res 367(1): 97-103. PubMed ID: 29580687

    Madan, A., Thimmaiya, D., Franco-Cea, A., Aiyaz, M., Kumar, P., Sparrow, J. C. and Nongthomba, U. (2017). Transcriptome analysis of IFM-specific actin and myosin nulls in Drosophila melanogaster unravels lesion-specific expression blueprints across muscle mutations. Gene 631: 16-28. PubMed ID: 28739398

    Katti, P., Thimmaya, D., Madan, A. and Nongthomba, U. (2017). Over-expression of miRNA-9 generates muscle hypercontraction through translational repression of the Troponin-T in Drosophila indirect flight muscles. G3 (Bethesda) [Epub ahead of print]. PubMed ID: 28866639

    Rai, M., Katti, P. and Nongthomba, U. (2016). Spatio-temporal coordination of cell cycle exit, fusion and differentiation of adult muscle precursors by Drosophila Erect wing (Ewg). Mech Dev [Epub ahead of print]. PubMed ID: 27039019

    Firdaus, H., Mohan, J., Naz, S., Arathi, P., Ramesh, S. R. and Nongthomba, U. (2015). A cis-regulatory mutation in Troponin-I of Drosophila reveals the importance of proper stoichiometry of structural proteins during muscle assembly. Genetics [Epub ahead of print]. PubMed ID: 25747460

    Kairamkonda, S. and Nongthomba, U. (2014). Beadex Function in the Motor Neurons Is Essential for Female Reproduction in Drosophila melanogaster. PLoS One 9: e113003. PubMed ID: 25396431

    Singh, S. H., Kumar, P., Ramachandra, N. B. and Nongthomba, U. (2014). Roles of the troponin isoforms during indirect flight muscle development in Drosophila. J Genet 93: 379-388. PubMed ID: 25189233

    Rai, M., Katti, P. and Nongthomba, U. (2014). Drosophila Erect wing (Ewg) controls mitochondrial fusion during muscle growth and maintenance by regulation of the Opa1-like gene. J Cell Sci 127: 191-203. PubMed ID: 24198395

  • Mohamed Noor Biology Department, Duke University
    Mittleman, B. E., Manzano-Winkler, B., Hall, J. B., Korunes, K. L. and Noor, M. A. (2017). The large X-effect on secondary sexual characters and the genetics of variation in sex comb tooth number in Drosophila subobscura. Ecol Evol 7(2): 533-540. PubMed ID: 28116050

    Manzano-Winkler, B., McGaugh, S. E. and Noor, M. A. (2013). How Hot Are Drosophila Hotspots? Examining Recombination Rate Variation and Associations with Nucleotide Diversity, Divergence, and Maternal Age in Drosophila pseudoobscura. PLoS One 8: e71582. PubMed ID: 23967224

    Heil, C. S. and Noor, M. A. (2013). Studying recombination with high-throughput sequencing: an educational primer for use with "fine-scale heterogeneity in crossover rate in the garnet-scalloped region of the Drosophila melanogaster X chromosome". Genetics 194: 335-339. PubMed ID: 23733850

    McGaugh, S. E., Heil, C. S., Manzano-Winkler, B., Loewe, L., Goldstein, S., Himmel, T. L. and Noor, M. A. (2012). Recombination modulates how selection affects linked sites in Drosophila. PLoS Biol 10: e1001422. PubMed ID: 23152720

    Hoehn, K. B., McGaugh, S. E. and Noor, M. A. (2012). Effects of premature termination codon polymorphisms in the Drosophila pseudoobscura subclade. J Mol Evol 75: 141-150. PubMed ID: 23132097

    Heil, C. S. and Noor, M. A. (2012). Zinc finger binding motifs do not explain recombination rate variation within or between species of Drosophila. PLoS One 7: e45055. PubMed ID: 23028758

  • Jasprien Noordermeer Leids Universitair Medisch Centrum, Netherlands
    Jantrapirom, S., Cao, D. S., Wang, J. W., Hing, H., Tabone, C. J., Lantz, K., de Belle, J. S., Qiu, Y. T., Smid, H. M., Yamaguchi, M., Fradkin, L. G., Noordermeer, J. N. and Potikanond, S. (2019). Dystrophin is required for normal synaptic gain in the Drosophila olfactory circuit. Brain Res 1712: 158-166. PubMed ID: 30711401

    Kruttner, S., Traunmuller, L., Dag, U., Jandrasits, K., Stepien, B., Iyer, N., Fradkin, L. G., Noordermeer, J. N., Mensh, B. D. and Keleman, K. (2015). Synaptic Orb2A bridges memory acquisition and late memory consolidation in Drosophila. Cell Rep 11: 1953-1965. PubMed ID: 26095367

    Wu, Y., Helt, J. C., Wexler, E., Petrova, I. M., Noordermeer, J. N., Fradkin, L. G. and Hing, H. (2014). Wnt5 and drl/ryk gradients pattern the Drosophila olfactory dendritic map. J Neurosci 34: 14961-14972. PubMed ID: 25378162

    Petrova, I. M., Lahaye, L. L., Martianez, T., de Jong, A. W., Malessy, M. J., Verhaagen, J., Noordermeer, J. N. and Fradkin, L. G. (2013). Homodimerization of the Wnt Receptor DERAILED Recruits the Src Family Kinase SRC64B. Mol Cell Biol. PubMed ID: 23979591

    van der Laan, A. M., Vangemert, A. M., Dirks, R. W., Noordermeer, J. N., Fradkin, L. G., Tanke, H. J., Jost, C. R. (2012) mRNA cycles through hypoxia-induced stress granules in live Drosophila embryonic muscles. Int J Dev Biol 56: 701-709. PubMed ID: 23319346

    Kruttner, S., Stepien, B., Noordermeer, J. N., Mommaas, M. A., Mechtler, K., Dickson, B. J. and Keleman, K. (2012). Drosophila CPEB Orb2A mediates memory independent of Its RNA-binding domain. Neuron 76: 383-395. PubMed ID: 23083740

    Lahaye, L. L., Wouda, R. R., de Jong, A. W., Fradkin, L. G. and Noordermeer, J. N. (2012). WNT5 interacts with the Ryk receptors doughnut and derailed to mediate muscle attachment site selection in Drosophila melanogaster. PLoS One 7: e32297. PubMed ID: 22403643

  • Akinao Nose Division of Transdisciplinary Sciences, University of Tokyo
    Nose, A.

    Yoon, Y., Park, J., Taniguchi, A., Kohsaka, H., Nakae, K., Nonaka, S., Ishii, S. and Nose, A. (2019). System level analysis of motor-related neural activities in larval Drosophila. J Neurogenet: 1-11. PubMed ID: 31172848

    Kohsaka, H., Zwart, M. F., Fushiki, A., Fetter, R. D., Truman, J. W., Cardona, A. and Nose, A. (2019). Regulation of forward and backward locomotion through intersegmental feedback circuits in Drosophila larvae. Nat Commun 10(1): 2654. PubMed ID: 31201326

    Takagi, S., Cocanougher, B. T., Niki, S., Miyamoto, D., Kohsaka, H., Kazama, H., Fetter, R. D., Truman, J. W., Zlatic, M., Cardona, A. and Nose, A. (2017). Divergent connectivity of homologous command-like neurons mediates segment-specific touch responses in Drosophila. Neuron 96(6): 1373-1387.e1376. PubMed ID: 29198754

    Matsunaga, T., Kohsaka, H. and Nose, A. (2017). Gap junction-mediated signaling from motor neurons regulates motor generation in the central circuits of larval Drosophila. J Neurosci [Epub ahead of print]. PubMed ID: 28115483

    Kohsaka, H., Guertin, P. A. and Nose, A. (2016). Neural circuits underlying fly larval locomotion. Curr Pharm Des. PubMed ID: 27928962

    Hasegawa, E., Truman, J. W. and Nose, A. (2016). Identification of excitatory premotor interneurons which regulate local muscle contraction during Drosophila larval locomotion. Sci Rep 6: 30806. PubMed ID: 27470675

    Fushiki, A., Zwart, M. F., Kohsaka, H., Fetter, R. D., Cardona, A. and Nose, A. (2016). A circuit mechanism for the propagation of waves of muscle contraction in Drosophila. Elife 5. PubMed ID: 26880545
    Itakura, Y., Kohsaka, H., Ohyama, T., Zlatic, M., Pulver, S. R. and Nose, A. (2015). Identification of inhibitory premotor interneurons activated at a late phase in a motor cycle during Drosophila larval locomotion. PLoS One 10: e0136660. PubMed ID: 26335437

    Kohsaka, H., Takasu, E., Morimoto, T. and Nose, A. (2014). A group of segmental premotor interneurons regulates the speed of axial locomotion in Drosophila larvae. Curr Biol 24: 2632-2642. PubMed ID: 25438948

  • Stéphane Noselli Université Nice
    Van De Bor, V., Loreau, V., Malbouyres, M., Cerezo, D., Placenti, A., Ruggiero, F. and Noselli, S. (2021). A dynamic and mosaic basement membrane controls cell intercalation in Drosophila ovaries. Development 148(4). PubMed ID: 33526583

    Chougule, A., Lapraz, F., Foldi, I., Cerezo, D., Mihaly, J. and Noselli, S. (2020). The Drosophila actin nucleator DAAM is essential for left-right asymmetry. PLoS Genet 16(4): e1008758. PubMed ID: 32324733

    Ghiglione, C., Jouandin, P., Cerezo, D. and Noselli, S. (2018). The Drosophila insulin pathway controls Profilin expression and dynamic actin-rich protrusions during collective cell migration. Development. PubMed ID: 29980565

    Tingler, M., Kurz, S., Maerker, M., Ott, T., Fuhl, F., Schweickert, A., LeBlanc-Straceski, J. M., Noselli, S. and Blum, M. (2018). A Conserved Role of the Unconventional Myosin 1d in Laterality Determination. Curr Biol 28(5): 810-816.e813. PubMed ID: 29478852

    Roumengous, S., Rousset, R. and Noselli, S. (2017). Polycomb and Hox genes control JNK-induced remodeling of the segment boundary during Drosophila morphogenesis. Cell Rep 19(1): 60-71. PubMed ID: 28380363

    Rousset, R., Carballes, F., Parassol, N., Schaub, S., Cerezo, D. and Noselli, S. (2017). Signalling crosstalk at the leading edge controls tissue closure dynamics in the Drosophila embryo. PLoS Genet 13(2): e1006640. PubMed ID: 28231245

    Van De Bor, V., Zimniak, G., Papone, L., Cerezo, D., Malbouyres, M., Juan, T., Ruggiero, F. and Noselli, S. (2015). Companion blood cells control ovarian stem cell niche microenvironment and homeostasis. Cell Rep [Epub ahead of print]. PubMed ID: 26456819

    González-Morales, .N, Géminard, C., Lebreton, G., Cerezo, D., Coutelis, J.B. and Noselli, S. (2015). The atypical cadherin Dachsous controls left-right asymmetry in Drosophila. Dev Cell [Epub ahead of print]. PubMed ID: 26073018

    Geminard, C., Gonzalez-Morales, N., Coutelis, J. B. and Noselli, S. (2014). The myosin ID pathway and left-right asymmetry in Drosophila. Genesis. PubMed ID: 24585718

    Parassol, N., Bienvenu, C., Boglio, C., Fiorucci, S., Cerezo, D., Yu, X. M., Godeau, G., Greiner, J., Vierling, P., Noselli, S., Di Giorgio, C. and Van De Bor, V. (2013). In Vivo Characterization of Dynein-Driven nanovectors Using Drosophila Oocytes. PLoS One 8: e82908. PubMed ID: 24349395

  • Leonard Nunney Department of Biology, University of California, Riverside
    Enders, L. S. and Nunney, L. (2015). Reduction in the cumulative effect of stress-induced inbreeding depression due to intragenerational purging in Drosophila melanogaster. Heredity (Edinb). PubMed ID: 26604190

    Enders, L. S. and Nunney, L. (2012). Seasonal stress drives predictable changes in inbreeding depression in field-tested captive populations of Drosophila melanogaster. Proc Biol Sci 279: 3756-3764. PubMed ID: 22719040

    Enders, L. S. and Nunney, L. (2010). Sex-specific effects of inbreeding in wild-caught Drosophila melanogaster under benign and stressful conditions. J Evol Biol 23: 2309-2323. PubMed ID: 20874846

  • Dmitry Nurminsky Biochemistry and Molecular Biology, University of Maryland School of Medicine
    Jiang, M., Gao, Z., Wang, J. and Nurminsky, D. I. (2018). Evidence for a hierarchical transcriptional circuit in Drosophila male germline involving testis-specific TAF and two gene-specific transcription factors, Mod and Acj6. FEBS Lett 592(1): 46-59. PubMed ID: 29235675

    Milon, B., Sun, Y., Chang, W., Creasy, T., Mahurkar, A., Shetty, A., Nurminsky, D. and Nurminskaya, M. (2014). Map of open and closed chromatin domains in Drosophila genome. BMC Genomics 15: 988. PubMed ID: 25407537

    Chen, H., Zheng, X. and Zheng, Y. (2014). Age-associated loss of lamin-B leads to systemic inflammation and gut hyperplasia. Cell 159: 829-843. PubMed ID: 25417159

    Mikhaylova, L. M. and Nurminsky, D. I. (2011). Lack of global meiotic sex chromosome inactivation, and paucity of tissue-specific gene expression on the Drosophila X chromosome. BMC Biol 9: 29. PubMed ID: 21542906

  • Roel Nusse Stanford University
    Mulligan, K. A., Fuerer, C., Ching, W., Fish, M., Willert, K. and Nusse, R. (2012). Secreted Wingless-interacting molecule (Swim) promotes long-range signaling by maintaining Wingless solubility. Proc Natl Acad Sci U S A 109: 370-377. PubMed ID: 22203956

    McElwain, M. A., Ko, D. C., Gordon, M. D., Fyrst, H., Saba, J. D. and Nusse, R. (2011). A suppressor/enhancer screen in Drosophila reveals a role for wnt-mediated lipid metabolism in primordial germ cell migration. PLoS One 6: e26993. PubMed ID: 22069480

  • Sergey Nuzhdin Molecular and Computational Biology, University of Southern California, Los Angeles
    Osman, N. M., Kitapci, T. H., Vlaho, S., Wunderlich, Z. and Nuzhdin, S. V. (2018). Inference of transcription factor regulation patterns using gene expression covariation in natural populations of Drosophila melanogaster. Biophysics (Oxf) 63(1): 43-51. PubMed ID: 30739944

    Ali, S., Signor, S. A., Kozlov, K. and Nuzhdin, S. V. (2019). Novel approach to quantitative spatial gene expression uncovers genetic stochasticity in the developing Drosophila eye. Evol Dev. PubMed ID: 30756455

    Foley, B. R., Marjoram, P. and Nuzhdin, S. V. (2017). Basic reversal-learning capacity in flies suggests rudiments of complex cognition. PLoS One 12(8): e0181749. PubMed ID: 28813432

    Signor, S. A., Abbasi, M., Marjoram, P. and Nuzhdin, S. V. (2017). Social effects for locomotion vary between environments in Drosophila melanogaster females. Evolution [Epub ahead of print]. PubMed ID: 28489252

    Kao, J. Y., Lymer, S., Hwang, S. H., Sung, A. and Nuzhdin, S. V. (2015). Postmating reproductive barriers contribute to the incipient sexual isolation of the United States and Caribbean Drosophila melanogaster. Ecol Evol 5: 3171-3182. PubMed ID: 26357543

    Fear, J. M., Arbeitman, M. N., Salomon, M. P., Dalton, J. E., Tower, J., Nuzhdin, S. V. and McIntyre, L. M. (2015). The Wright stuff: Reimagining path analysis reveals novel components of the sex determination hierarchy in Drosophila melanogaster. BMC Syst Biol 9: 53. PubMed ID: 26335107

    Kurmangaliyev, Y. Z., Favorov, A. V., Osman, N. M., Lehmann, K. V., Campo, D., Salomon, M. P., Tower, J., Gelfand, M. S. and Nuzhdin, S. V. (2015). Natural variation of gene models in Drosophila melanogaster. BMC Genomics 16: 198. PubMed ID: 25888292

    Campo, D., Lehmann, K., Fjeldsted, C., Souaiaia, T., Kao, J. and Nuzhdin, S. V. (2013). Whole-genome sequencing of two North American Drosophila melanogaster populations reveals genetic differentiation and positive selection. Mol Ecol. PubMed ID: 24102956

    Main, B. J., Smith, A. D., Jang, H. and Nuzhdin, S. V. (2013). Transcription start site evolution in Drosophila. Mol Biol Evol 30: 1966-1974. PubMed ID: 23649539

    Winbush, A., Reed, D., Chang, P. L., Nuzhdin, S. V., Lyons, L. C. and Arbeitman, M. N. (2012). Identification of gene expression changes associated with long-term memory of courtship rejection in Drosophila males. G3 (Bethesda) 2: 1437-1445. PubMed ID: 23173095

  • Todd Nystul UCSF Center for Reproductive Studies, San Francisco
    Tatapudy, S., Peralta, J. and Nystul, T. (2021). Distinct roles of Bendless in regulating FSC niche competition and daughter cell differentiation. Development 148(22). PubMed ID: 35020878

    Rust, K., Byrnes, L. E., Yu, K. S., Park, J. S., Sneddon, J. B., Tward, A. D. and Nystul, T. G. (2020). A single-cell atlas and lineage analysis of the adult Drosophila ovary. Nat Commun 11(1): 5628. PubMed ID: 33159074

    Fadiga, J. and Nystul, T. G. (2019). The follicle epithelium in the Drosophila ovary is maintained by a small number of stem cells. Elife 8. PubMed ID: 31850843

    Benitez, M., Tatapudy, S., Liu, Y., Barber, D. L. and Nystul, T. G. (2019). Drosophila anion exchanger 2 is required for proper ovary development and oogenesis. Dev Biol. PubMed ID: 31071312

    Kim-Yip, R. P. and Nystul, T. G. (2018). Wingless promotes EGFR signaling in follicle stem cells to maintain self-renewal. Development. PubMed ID: 30389852

    Cook, M. S., Cazin, C., Amoyel, M., Yamamoto, S., Bach, E. and Nystul, T. (2017). Neutral competition for Drosophila follicle and cyst stem cell niches requires vesicle trafficking genes. Genetics [Epub ahead of print]. PubMed ID: 28512187

    Johnston, M. J., Bar-Cohen, S., Paroush, Z. and Nystul, T. G. (2016). Phosphorylated Groucho delays differentiation in the follicle stem cell lineage by providing a molecular memory of EGFR signaling in the niche. Development. PubMed ID: 27836963

    Ulmschneider, B., Grillo-Hill, B.K., Benitez, M., Azimova, D.R., Barber, D.L. and Nystul, T.G. (2016). Increased intracellular pH is necessary for adult epithelial and embryonic stem cell differentiation. J Cell Biol 215: 345-355. PubMed ID: 27821494

    Castanieto, A., Johnston, M. J. and Nystul, T. G. (2014). EGFR signaling promotes the identity of follicle stem cells via maintenance of partial cell polarity. Elife 3. PubMed ID: 25437306

    Sahai-Hernandez, P. and Nystul, T. G. (2013). A dynamic population of stromal cells contributes to the follicle stem cell niche in the Drosophila ovary. Development 140: 4490-4498. PubMed ID: 24131631


  • Return to The Interactive Fly