odd-skipped
Even-skipped functions to repress odd-skipped. Thus odd-skipped could be a true secondary pair-rule gene whose range of expression is determined by EVE (Manoukian, 1993).
Ectopic expression of the 69 kDa Tramtrack protein significantly represses even-skipped, odd-skipped, hairy and runt. The 88 kDa form does not similarly repress these genes (Brown, 1993).
The response kinetics of known and
putative target genes of Fushi tarazu has been examined in order to distinguish between direct and indirect Ftz targets. This kinetic analysis was achieved by providing a brief
pulse of Ftz expression and measuring the time required
for genes to respond. The time required for Ftz to bind and
regulate its own enhancer, a well-documented interaction,
is used as a standard for other direct interactions.
Surprisingly, both positively and negatively
regulated target genes respond to Ftz with the same kinetics
as autoregulation. The rate-limiting step between
successive interactions (less than 10 minutes) is the time required
for regulatory proteins to either enter or be cleared from
the nucleus, indicating that protein synthesis and
degradation rates are closely matched for all of the proteins
studied. The matching of these two processes is likely to be
important for the rapid and synchronous progression from
one class of segmentation genes to the next. In total, 11
putative Ftz target genes have been analyzed, and the data provide
a substantially revised view of Ftz roles and activities
within the segmentation hierarchy (Nasiadka, 1999).
To determine the regulatory relationships between Ftz and the
other non-primary pair-rule genes, the expression
of odd-skipped (odd) and sloppy-paired (slp) was examined in HSFtz
embryos fixed 20 and 35 minutes post Ftz induction.
Expression patterns of these genes were also examined in ftz
mutant embryos to obtain genetic confirmation of the
interactions observed.
Like ftz, en and prd, odd appears to be directly activated by
Ftz. In stage 5 embryos, ectopic expression of Ftz causes rapid
expansion of odd, from its initiating pattern of six stripes, to near homogeneous expression across the germband. In stage 6 embryos, odd is normally expressed in 14
evenly expressed stripes. Ectopic Ftz causes an
intensification of the primary odd stripes at this stage.
These stripes are derived from the original 7 stripes that overlap
ftz stripes. In stage 7 embryos, these primary stripes are not
only intensified, but expand anteriorly as well (from about 1
cell wide to 2 cells wide). The percentage of
embryos responding to ectopic Ftz, at all stages tested, is
about the same as the percentage of embryos that show ftz
autoregulation, en and prd activation and wg repression. Thus,
Ftz appears to be an activator of odd at all stages tested. This
positive relationship between Ftz and odd is consistent with the
differences in odd expression observed in ftz mutant embryos.
Stripes of odd appear to be diminished in intensity in stage 5
embryos, and primary stripes are weak or missing in
stage 6 and 7 embryos (Nasiadka, 1999).
Unlike prd and odd, the pair-rule gene slp is negatively
regulated by Ftz: ectopic expression of Ftz results in the
differential repression of secondary slp stripes.
Again, the penetrance of repression at the 20 minute recovery
time was about 60%, as has been measured for the other genes
exhibiting direct responses. As might be expected, slp stripes
expand in ftz mutant embryos, filling the regions where Ftz is
normally expressed. Thus, as with wg, Ftz appears to
act as a direct repressor of slp. This effect is likely exerted
through the response elements or trans-acting factors that
regulate secondary stripe expression (Nasiadka, 1999).
Working out the effects of Rpd3
on segmentation gene expression requires the scientific equivalent of investigative journalism. The Berkeley Drosophila Genome Project identified a P-induced lethal
mutation (l(3)04556) that maps 47 bp downstream of the Rpd3 putative transcription start site. Previous work by Perrimon (1996) has shown that embryos derived from l(3)04556
homozygous germline clones exhibit pair-rule patterning defects that are similar to those observed in fushi tarazu mutants.
It was first established that most repressors are active in Rpd3 mutant embryos. These results suggest that the Rpd3
mutation might impair expression of Fushi tarazu or Ftz-F1 proteins, known to be gene activators, because these are required for the expression of the
even-numbered engrailed stripes. Alternatively, the loss of Rpd3 might lead to a change in the
expression pattern of a repressor, which in turn inhibits Ftz activity (Mannervik, 1999).
To distinguish between these
possibilities, an examination was made of the expression of odd-skipped, a known repressor of en. odd is initially expressed in a pair-rule pattern of seven stripes, but during gastrulation seven
additional secondary stripes are formed to generate a 14-stripe expression pattern. In normal
embryos, these stripes are evenly spaced, whereas in Rpd3 mutants they are not. In
the mutant embryos there is a partial pair-wise alignment of adjacent odd stripes. A similar change is
observed in eve embryos. Previous studies suggest that both ftz and odd stripes are under the control of the Eve repressor.
Differential repression of ftz and odd resolves the two patterns, so that each ftz stripe is normally
shifted anterior to each odd-numbered odd stripe. In Rpd3 mutants, the ftz and odd patterns
fail to resolve, so that odd-numbered odd stripes mostly coincide with the ftz stripes.
It is suggested that this failure in ftz-odd resolution is responsible for the pair-rule phenotype observed in
Rpd3 mutant embryos. A prediction of this proposal is that eve mutants should exhibit
similar alterations in the ftz and odd expression patterns. Double staining assays reveal that
eve mutant embryos exhibit a similar failure to resolve the ftz and odd expression patterns (Mannervik, 1999).
There are several possible explanations for impaired Ftz function in Rpd3 mutants. It is conceivable
that the Rpd3 mutation disrupts Ftz-mediated activation. However, the idea that Rpd3
functions as a corepressor of Eve is favored. The similarities in the Rpd3 and ftz mutant phenotypes may be
caused by the coincident odd and ftz expression patterns observed in embryos derived from l(3)04556
germline clones. The Odd repressor is thought to block Ftz-mediated activation
of en. Evidence is presented that this expansion in Odd might result from an inability
of Eve to repress odd expression in Rpd3 mutant embryos. Consistent with this proposal, in vitro translated Eve is shown to interact with a glutathione S-transferase-Rpd3 fusion protein. Because the Eve repressor is required for both the odd- and even-numbered en stripes, it
would appear that the Rpd3 mutation does not cause a general loss of Eve function. It would therefore appear that Eve fails to repress certain promoters (e.g., odd and
possibly ftz) in Rpd3 mutant embryos, but retains repressor function on other promoters (e.g., paired
and sloppy-paired). This selectivity in the regulation of different target promoters is consistent with
the notion that Eve mediates repression through multiple mechanisms, including the recruitment of
corepressors and direct interactions with TBP. Multiple modes of repression may be mediated
by other transcriptional repressors, such as Hairy, which appears to interact with different classes of
corepressors (Mannervik, 1999 and references).
The possession of segmented appendages is a defining characteristic of the arthropods. By analyzing both loss-of-function and ectopic expression experiments, the Notch signaling pathway has been shown to play a fundamental role in the segmentation and growth of the Drosophila leg. Local activation of Notch is necessary and
sufficient to promote the formation of joints between segments. This segmentation process requires the participation of the Notch ligands, Serrate and Delta, as well
as Fringe. These three proteins are each expressed in the developing leg and antennal imaginal discs in a segmentally repeated pattern that is regulated downstream
of the action of Wingless and Decapentaplegic. While Dl expression overlaps fngand Ser, in some cases, it appears to extend into regions of the disc where neither fng nor Ser is expressed (Rauskolb, 1999).
While the requirements for odd-skipped (odd) function during leg development have not yet been described, this gene is of special interest because it is required for embryonic segmentation in Drosophila and is expressed in a segmentally repeated pattern both in the embryo and in leg discs. odd expression, like nub, is induced within clones of cells expressing activated Notch in many regions of the leg disc, though not in ta1-ta4. The observation that three different genes expressed in segmentally repeated patterns all respond to Notch signaling, together with the severe effects of Notch mutant clones, indicates that Notch acts at a crucial step in a leg segmentation hierarchy. Together, these observations outline a regulatory hierarchy for the segmentation and growth of the leg. The Notch pathway is also deployed for segmentation during vertebrate somitogenesis, which raises the possibility of a common origin for the segmentation of these distinct tissues (Rauskolb, 1999).
Homeodomain proteins are DNA-binding transcription
factors that control major developmental patterning
events. Although DNA binding is mediated by the
homeodomain, interactions with other transcription
factors play an unusually important role in the selection
and regulation of target genes. A major question in the field
is whether these cofactor interactions select target genes by
modulating DNA binding site specificity (selective binding
model), transcriptional activity (activity regulation model)
or both. A related issue is whether the number of target
genes bound and regulated is a small or large percentage
of genes in the genome. These issues have been addressed using a chimeric protein that contains the
strong activation domain of the viral VP16 protein fused to
the Drosophila homeodomain-containing protein Fushi
tarazu. Genes previously thought not to
be direct targets of Ftz remain unaffected by FtzVP16.
Addition of the VP16 activation domain to Ftz does,
however, allow it to regulate previously identified target
genes at times and in regions that Ftz alone cannot. It also
changes Ftz into an activator of two genes that it normally
represses. Taken together, the results suggest that Ftz binds
and regulates a relatively limited number of target genes,
and that cofactors affect target gene specificity primarily
by controlling binding site selection (Nasiadka, 2000).
Activity regulation plays an
important role in Ftz function, but this role is mainly to
refine the temporal and spatial windows of target gene
regulation and to modulate levels of expression. This
conclusion is supported by the following observations. Five of
the genes tested (ftz, odd, slp, en and wg) could be activated
ectopically by FtzVP16 in regions and at times that Ftz could
not induce a response. This shows that Ftz has the ability to
bind to these promoters, but that it must be bound in an inactive
state. For Ftz to function in these cells, it probably requires the
addition of requisite cofactors, the removal of repressors or
both. For the five genes listed above, the VP16 activation
domain is able to overcome some of these limitations.
The regulation by Ftz of en is a good example of this type
of temporal and spatial refinement in activity. Results with
FtzVP16 show that Ftz can bind to the en promoter during
the time that ftz autoregulation and odd activation are well
under way. However, the ability of Ftz to activate en is
normally delayed until cellularization is completed (approx. 45
minutes). This delay may be necessary to allow other en
regulators to resolve into the complex patterns of expression
that are required for en to initiate in 14 narrow stripes.
Like most homeodomain proteins, Ftz has the ability to
function as both a transcriptional activator and repressor. This
dual capacity suggests a requirement for distinct activity-regulating
cofactors. However, differential activity can also be
achieved, at least in part, by binding to different sites on
different genes. For example, the response elements required
for repression of the Distalless gene by Ubx and activation by Dfd are different.
This also appears to be the case for activation of the dpp gene
by Ubx and its repression by Abd-A. The different
cofactors that help recruit the three proteins to these sites may
also be partly responsible for their differences in transcriptional
activity. For example, Exd is thought to generally work as a
coactivator, acting in part to alter Hox protein conformation. Other factors bound in the vicinity of these sites
are also likely to play a major role in activity regulation (Nasiadka, 2000).
In addition to showing that positively acting cofactors are
important for Ftz specificity, these data implicate the actions of
powerful negative regulators that limit the gene's temporal and spatial
domains of activity. The strength and diversity of these
negative regulators were emphasized by their ability to suppress
the actions of the fused VP16 activation domain despite its
previously reported reputation of strength and autonomy. It
may be the low DNA binding specificity of the homeodomain
that has necessitated this need for diverse mechanisms of
repression, since low DNA specificity provides the potential to
regulate a large number of inappropriate target genes. Indeed,
a rapidly growing number of homeodomain proteins have been
shown to be capable of functioning as oncogenes or proto-oncogenes, and oncogenicity can
be conferred by fusions to other transcriptional activators. Further studies will be required to
identify many of the cofactors and inhibitors that modulate Ftz
activity and to determine how they do so (Nasiadka, 2000).
Odd-skipped is a negative regulator of engrailed. The runt gene is required to limit the domains of engrailed expression in the odd numbered parasegments, while the odd-skipped gene is required to limit the domains of en expression in the even-numbered parasegments.
Activation of en at the anterior margins of both sets of parasegments requires the repression of runt and odd by the product of the eve gene (Manoukian, 1993). In addition, ODD represses expression of fushi tarazu, a known activator of engrailed (Mullen, 1995).
wingless expression is a regulated by both odd-skipped and the pair-rule gene paired. Odd-skipped represses wg expression, while Paired restricts the domain of expression of odd-skipped .
Although many of the genes that pattern the segmented
body plan of the Drosophila embryo are known, there
remains much to learn in terms of how these genes and
their products interact with one another. Like many of
these gene products, the protein encoded by the pair-rule
gene odd-skipped (Odd) is a DNA-binding transcription
factor. Genetic experiments have suggested several
candidate target genes for Odd, all of which appear to be
negatively regulated. Pulses of ectopic Odd
expression have been used to test the response of these and other
segmentation genes. Three different phenotypes are generated in embryos in which odd is expressed from a heat shock promoter: head defects only, a pair-rule phenotype
and a pair-rule phenotype restricted to the dorsal half of the
embryo.
The head defects only phenotype prevails when Odd is
induced between 2:10 and 2:30 hours after egg laying (AEL). The second phenotype is generated when Odd is induced between 2:30 and 2:50 AEL, while the third phenotype prevails when heat
shocks are administered between
2:50 and 3:10 AEL. The results are complex, indicating
that Odd is capable of repressing some genes wherever and
whenever Odd is expressed, while the ability to repress
others is temporally or spatially restricted (Dréan, 1998).
Two of the seven pair-rule genes tested do not show
significant changes in expression at the stages examined. These
include the genes odd-paired (opa) and, surprisingly, ftz. In odd minus embryos, ftz stripes do not
resolve properly, remaining about 3 cells wide until
well into the process of germ band extension. This suggests that Odd may be a repressor
of ftz. However ectopic Odd does not
repress ftz expression. Also unexpected was the fact that
ectopic Odd has effects on all three of the ëprimaryí pair-rule
genes. These were previously thought not to be regulated by
Odd. In stage 5 embryos, stripe 1 of hairy is
efficiently repressed by ectopic Odd. The first stripe
of eve is also repressed at this stage.
Repression of h stripe 1 continues in older embryos and is
accompanied by weaker repression of stripes 2-6. These
effects of Odd on h correlate with what appears to be a modest
broadening of h stripes in odd-minus embryos, particularly stripe 1. Early repression of the first stripes of h and eve
likely accounts for the cuticular head defects that arise from
early pulses of ectopic Odd expression.
Interestingly, in odd-minus embryos, the entire 7-stripe pattern of
h appears to expand, both anteriorly and posteriorly. This is
also true of eve and runt stripes. These data provide
no explanation for this, but it may explain the fairly consistent
spacing of h stripes, despite their apparent broadening (Dréan, 1998).
One
target gene, fushi tarazu, is both repressed and activated by
Odd, the outcome depending upon the stage of
development. Rather than negatively
regulating ftz, ectopic Odd causes a rapid expansion of all 7
ftz stripes. In some embryos, interstripe regions are
difficult to discern. Since this activation is
observed within 20-25 minutes of Odd induction,
it likely reflects a direct interaction between the
two genes. Consistent with this positive
relationship, initiating ftz stripes are irregular in
width and intensity in odd mutant embryos. Stripes 3-6 are the most strongly affected,
particularly stripe 4. Odd does appear to
be able to repress the ftz gene, but only in the
middle region of the ftz parasegment, and only
after gastrulation. When Odd
switches from an activator to a repressor of ftz, its ability to
repress ftz is excluded from the anterior-most cells of each ftz
stripe. The inability of Odd to repress ftz in these cells indicates
that either a necessary cofactor for Odd is missing in these
cells, or that an overriding factor is present. Another possibility
is that the levels of Odd required to repress ftz are higher than
those that were induced. Previous studies could not establish unambiguously whether
Odd acts as a direct or indirect repressor of the en and wg genes. The data presented here show that
during gastrulation Odd appears to regulate both genes, not
only directly, but indirectly as well. Indirect repression is
mediated by selective repression of the en and wg activators:
ftz, prd, eve and slp. The result of these interactions in hs-odd
embryos is first the loss of all fourteen en and wg stripes due
to direct repression and then failure of certain stripes to
reinitiate. These results indicate that the activity of Odd
is highly dependent on the presence of cofactors and/or
overriding inhibitors. Based on these results, and the
segmental phenotypes generated by ectopic Odd, a number of new roles for Odd in the patterning of
embryonic segments are suggested. These include gap-, pair rule- and
segment polarity-type functions (Dréan, 1998).
The early expression of the Drosophila segment polarity gene gooseberry is under the control of the pair-rule genes.
A 514-bp enhancer, -5.3 to -4.8 kb interval (called
fragment IV), has been identified that reproduces the early gsb expression pattern in transgenic flies. The
transcription factor Paired (Prd) is the main activator of this enhancer in all parasegments of the embryo. It binds to paired-and
homeodomain-binding sites, which are segregated on the enhancer. Using site-directed mutagenesis,
sites critical for Prd activity have been identified. Negative regulation of this enhancer is mediated by the Even-skipped protein (Eve) in the
odd-numbered parasegments and by the combination of Fushi-tarazu (Ftz) and Odd-skipped proteins in the even-numbered
parasegments. The organization of the Prd-binding sites, as well as the necessity for intact DNA binding sites for both the
paired- and homeodomain-binding sites, suggests a molecular model whereby the two DNA-binding domains of the Prd protein
cooperate in transcriptional activation of gsb. This positive activity appears to be in competition with Eve and Ftz on Prd
homeodomain-binding sites (Bouchard, 2000).
The establishment of the posterior border of gsb in the
even-numbered parasegments requires an efficient mechanism
of repression, since Prd is present throughout all all even-numbered
parasegments at the time of gsb initiation. The expression of
transgenic line IV-LacZ is derepressed in ftz and odd
mutant embryos. Moreover, Prd activity is directly
competed by Ftz and Odd in tissue cultured cells. These data identify Ftz and Odd proteins as being responsible for the establishment of gsb expression borders in the
even-numbered parasegments (Bouchard, 2000).
In the genetic analysis of fragment IV, it was observed that
neither ftz nor odd mutant embryos show a complete
derepression in the even-numbered parasegments. An odd
embryo shows an anterior widening of the odd-numbered
gsb stripes, suggesting a more important role for Odd in the
region of low Ftz concentration. This result also indicates
that Ftz is a potent repressor in the embryo since it is still
able to partially repress gsb, even though Prd levels remain
high in the central part of the even-numbered parasegments
in an odd embryo, as opposed to its gradual
repression in this region in a wild-type background. In a ftz embryo,
a posterior widening of two to three cells in the
even-numbered stripes is observed. This limited expansion can be
explained by the action of Odd in the posteriormost
portion of the parasegment combined with the fact that
Prd is fading exclusively in this region in a ftz mutant
embryo.
The true repressor effect of Odd on fragment IV is
possibly masked in these genetic experiments by the fact
that, in an odd mutant embryo, Ftz is not properly
repressed in the posterior portion of the parasegment. In such an embryo, Ftz is
thus compensating for the absence of Odd. At the molecular
level, the mechanism of action of Odd is unclear.
It is possible that Odd binds directly to fragment IV via
its zinc-finger domain, but this interaction would have
been missed due to insufficient binding activity in vitro.
Alternatively, Odd could bind Prd via protein-protein
interaction and thereby interfere with its transactivation
properties (Bouchard, 2000).
Drosophila Groucho, like its vertebrate Transducin-like Enhancer-of-split homologues, is a corepressor that silences gene expression in numerous developmental settings. Groucho itself does not bind DNA but is recruited to target promoters by associating with a large number of DNA-binding negative transcriptional regulators. These repressors tether Groucho via short conserved polypeptide sequences, of which two have been defined: (1) WRPW and related tetrapeptide motifs have been well characterized in several repressors; (2) a motif termed Engrailed homology 1 (eh1) has been found predominantly in homeodomain-containing transcription factors. A yeast two-hybrid screen is described that uncovered physical interactions between Groucho and transcription factors, containing eh1 motifs, with different types of DNA-binding domains. One of these, the zinc finger protein Odd-skipped, requires its eh1-like sequence for repressing specific target genes in segmentation. Comparison between diverse eh1 motifs reveals a bias for the phosphoacceptor amino acids serine and threonine at a fixed position, and a mutational analysis of Odd-skipped indicates that these residues are critical for efficient interactions with Groucho and for repression in vivo. These data suggest that phosphorylation of these phosphomeric residues, if it occurs, will down-regulate Groucho binding and therefore repression, providing a mechanism for posttranslational control of Groucho-mediated repression (Goldstein, 2005).
The eh1 Gro recruitment domain was originally defined as a heptapeptide motif that is conserved in members of the En family of homeodomain proteins and their vertebrate homologues. More recently, eh1-dependent binding to Gro has also been demonstrated in vitro for various other Drosophila and mammalian proteins, nearly all of which contain homeodomains. Given that Bowl and Odd, two non-homeodomain ZnF transcription factors, contain this motif and interact with Gro, the possibility was explored that eh1 motifs are prevalent among additional non-homeodomain transcription factor families. Indeed, an unbiased yeast screen for Gro-interacting proteins selected two additional transcriptional regulators that contain eh1-like motifs, namely, Sloppy-paired (Slp; Forkhead related) and Dorsocross (Doc; T box). Alignment of the eh1-like sequences of Bowl, Odd, Slp, and Doc with those of En and Gsc revealed three conserved amino acids: phenylalanine-x-isoleucine-x-x-isoleucine (Phe-x-Ile-x-x-Ile, where x is any amino acid). Subsequent database searches for presumptive Drosophila transcription factors containing this minimal peptide sequence identified a wide range of potential negative regulators belonging to different superfamilies as classified by their distinct DNA-binding domain types. Remarkably, eh1-related motifs have been preserved in many human homologues of these fly proteins, indicating that the ability to bind Gro/TLE has been evolutionarily conserved in human transcriptional regulators and that this sequence may have been widely adopted throughout the proteome as a Gro recruitment domain (Goldstein, 2005).
Several representatives, corresponding to different transcription factor families, were tested for the ability to bind Gro in biochemical assays. Where possible, full-length expressed sequence tags encoding these proteins were obtained; otherwise, single exons containing the eh1-like sequence were PCR amplified from genomic DNA. Each polypeptide was assessed for the ability to pull down radiolabeled Gro in vitro. GST-tagged Slp and Doc (amino acids 254 to 391) readily retain Gro, as do Eyes absent (Eya) and the homeodomain proteins Ventral nervous system defective (Vnd, 1 to 465), Bagpipe (Bap, 1 to 129), BarH1, and Empty spiracles (Ems, 1 to 360), as well as the orphan nuclear hormone receptor DHR96. To confirm that these interactions rely on intact eh1-related sequences, the eh1 motif of one of these, BarH1, was mutated by substituting glutamic acid for Phe at position 1, finding that its binding to Gro is reduced by >60% (Goldstein, 2005).
Based on these data, as well as on previous studies on En and Gsc, it is concluded that the eh1 peptide sequence, found in various proteins that belong to a wide range of distinct transcription factor families, is a good predictor of Gro-binding capability in vitro. Moreover, in vivo analysis of Odd's eh1 motif indicates that the above eh1 sequences impart Gro-mediated repression to a multitude of transcription factors (Goldstein, 2005).
The amino acid threonine is an essential element of Odd-skipped's eh1 domain. Comparison of more than 80 different eh1 regions revealed several recurring features, such as the prevalence of negatively charged amino acids at positions 4 and 5 between the two Ile residues, as well as a striking bias (>60%) toward Ser/Thr residues in position 2 adjacent to the invariant Phe residue. Given that phosphorylation of transcription factors has been well documented as a mechanism for regulating transcriptional outcomes, the importance of these potential phosphoacceptor amino acids for binding to Gro was examined by replacing the Thr residue in Odd's eh1 motif (T385) with other amino acids. The C-terminal 57-amino-acid portion of Odd binds Gro in a GST pulldown assay, whereas changes to alanine (T385A), methionine (T385M), or histidine (T385H) markedly reduce this interaction. In fact, the only construct tested that retains full binding to Gro is one in which Thr was changed to Ser (T385S). Thus, the Odd-Gro interactions appear highly sensitive to amino acid modifications at residue T385 (Goldstein, 2005).
To test if the above alterations affect Odd's repressor activity, flies were generated carrying Odd derivatives harboring modifications in T385. These were expressed throughout embryos under heat shock control and tested for the ability to repress two Odd targets, namely, eve stripe 1 and the secondary stripes of prd, both of which are fully repressed in close to 100% of embryos expressing native Odd. For simplicity of quantification, target gene repression was classified as 'full', 'partial', or 'none', with results depicted as the percentage of embryos displaying the corresponding expression pattern. Expression of the Odd T385S transgene was found to lead to strong repression of both targets, consistent with this variant's ability to bind Gro in vitro. In contrast, the T385A and T385M alterations brought about a significant loss of repressor activity, particularly of eve and less dramatically of prd. Thus, consistent with the biochemical protein interaction assay, a Ser/Thr residue appears to be a crucial element of the eh1 Gro recruitment domain for Odd, and presumably for other repressors as well (Goldstein, 2005).
The effect phosphorylation might have on Odd's repressor function was examined by introducing a negative charge at this site through the exchange of Odd's Thr residue for Asp (T385D). The C-terminal portion of Odd, containing the T385D alteration, does not associate with Gro in a GST pulldown assay. Furthermore, this pseudophosphorylated form of Odd is a much weaker repressor of eve stripe 1 and secondary prd stripes than T385M or T385A, being as ineffective as OddDeltaeh1. This suggests that if the Thr residue in the eh1 domain of Odd is subjected to phosphorylation, this modification would probably block binding to Gro and transcriptional repression (Goldstein, 2005).
Gro recruitment domains are not simply interchangeable. Whether the eh1- and WRPW-like Gro recruitment domains are interchangeable in vivo was tested by exchanging the eh1 sequence in Odd for a WRPW motif (OddDeltaeh1/WRPW). The WRPW motif has been shown to confer repressor potential on a number of transcription factors, and in line with this, the OddDeltaeh1/WRPW variant binds Gro vigorously in vitro. Unexpectedly, however, when misexpressed throughout the embryo, this transgene represses Odd target genes rather weakly. This result suggests that, at least with regard to Odd, the eh1 and WRPW motifs are not simply interchangeable. It is surmised that Odd's eh1-like sequence necessitates a particular structural and/or conformational context, or the cooperation of other distinct domains within Odd, for presenting Gro in a way that will mediate efficient transcriptional repression in vivo (Goldstein, 2005).
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