D.melanogaster Rtf1 Genomic EvoPrintBlack capital letters represent bases in the D.melanogaster Rtf1 reference sequence that are conserved in the D.simulans, D.sechellia, D.erecta, D.yakuba, D.ananassae, D.pseudoobscura, D.persimilis and D.mojavensis orthologous DNAs. |
gctctgctgcgcatgctccaaagctgagcttcaaagctccgagctcggcatttcgagggtggatcgtcgggggttgggtggttaa
tgcgaaatccatctacaggggtcgctgcgaaatggtcttgtattacagaatccgcagatcaacaaattaatgggaaaatatattg
tttacaggaattgagaaacttacgggcaagggtagttcataatgtttattatgtttcgaagggtcttattgaaggcatctttaaa
gtgaagcacacaattttaaaaagagatttatagtaacagaagaaataatttatttgttcatcacgttgagaactcactgttttga
aatatggtttttcggttgggcggtggcatcgggttggttgttttcatgagttgtcgcattgctgctgctctcgtcgtagtcgttg
ttgctgcagaatgtgcactttgttgaatgtgcaatgggcttcctcgtggcgctgttattgttgctacaactgcTGCtACtGCAAA
TTGCCaCGcAGCATTTAAGgCGAATTATGAAAgttcgtatgtgggtgcgtgttccaccctccaccccccaaaaaaaaacccaccc
ctttcgcccccgctggcagcatgaacttagggaaagcgcgctcgagggacctggaaaacgcCtGcATTTTAATTAATATTGATTG
taAgcTATTttatgtgtggggaaggggggcagcaggtgtggctTTAATTTAGTTTtCaAAAtgtgtttttgcgtggggcacaaac
aagtacataacccacttaccagcgtgcagacaaatgtttgcctattacagggtacacaaagtcagcattcccgcccagccattcg
gtatcatcatgcaaattgaagggggctgggatagggataatggggatgccgaaatttgcatttcaattctgccgccgccggcatt
tccattcccctgcacctccacccacgtccccaccccaccccttatgtttaccttgctcgaacagcttcgccgtattttttcaact
ctgctttaagtgtgattcagtgttgcgctcgacagcgcggcaaaatgtgcacgtgctgcaccagccgcaaggtatttccccgcag
tggtgggtggtaggtcctgtcgcgtcctgtccgagctcaaaaaactccaaaaggaattgggctcgagttcaaaataagcgattat
ttaagggtgtcacatgacatacaagggtaccaaattacttaaaaaggagagtctgatattttaaaatgaatcaatcaaagggact
actattcgttttaagttgtttttttttttttaacaattttacaagcaaaatgagttcgaagatagttgtcaaggatacaaagata
tacaattgtttatattcgctattattattgttactattaagttagaataacttgcttacataaaataaactgaatccaattgggt
aaattcacttaagctacacgtgaatttgaaaacacgatttgttgcttatttataaaaatataaataaaagtcggagattcccctt
gaatcccttttgaaactgttcccactcaatgtgttccctgggatcaaatagttttcccgcgcttacagctgacagctcgattact
gttgccagccctagcatatcgatagcacgtagcgaggacagacaaaatcccgataggccatatcacactcgttgccatctccaac
ggcacgcactaaaattttttcgttctgatttggttaaattttattattaagtaaaggccaggaaacgatcggaaatgggcaaacg
gcggacgcaatccctgatcgactccaactccagcgatagcgacagcgagtccgagaccAAtcTgGAaTCGGTgAGTggctataga
atagatcaaatgcatcatccgcgcccctttctccatattgcgatgtaacgaaaatcaatataaatactgaaaatacaccttatat
gtaatccccaggacctgatgtcgctcGCcaAGAAGcGaAAGAAGCCccaaacggcggccaagtcaagttcccgcTCcGAcTCtGA
TTccgacTGGGCcAACAAcAAAgctgGaGCtCCctcgtccaaGAAGAAgAAGCGtCagAAGcCCAGcaGagActccagctcctcg
gagtccaattgggatgacgacagtcaggatgagaggcagccagcgaggcagagtcctgcacagacgcaacaggagcacaagcccc
cggagcaggcctcccagcccgcccagctcagcgagcaggaggagggcgaggtctccgatagcgattccgacaagtccaagtccaa
ctcctcctcatccgGCTCcgacTCcTCtAGttcttcctccAGCTCcgactcggaatttgacgacgggttCGAtGAtgacctcATG
GGcGAtgatGAGGAtCGaAgGCgtCTcAAtGgttTGTCcgagaaggagcgtgaaactgaaatttacaagcgcattgagcagcgcg
agattatgcgaacgcgctgggaaatcgaacggaaactgaagctggcaaggcgcggcgagaaaaaccaagaaaagtccaagaacaa
aggagaacgggccaagaagaagaaggaaaagcgcgagaagaaggcgaggaaagccagggaagcccaggcgcccttgccaactcaa
gcttccacatccacacttttagatgtcgaacccaagcccagcaacgaagtacggtcagcgagtccgttgtccacgcctgccctta
accgagatgcggcttccacttcagcggcagtggccagtattatgcccgacgatgcagcttcctccgctggcgtctctgattacTT
TGATCACAAgGAaCGtTCCAAGGAGCGcAAGAAGAAcGTgGAGGCcAACAAgACggAcGAcAAGaGgAGcAATGCcATGGCctta
ttaaAaGCCAAaaGaGagGgcaaggctaaaAGaggTAaGcatcagtcgatcataatcgtcatacgactctaatgtgttgtttttt
ccattcacctTGCagaaGAgGAGGaagCcAAacGcatgGCaGAaaaaGAtcgtGAtGAcGACAAaGAGGAaCTcGAtAGcGTatc
tggttgtaAATCGGCcGTgAAaCTGAAAGCcTCtGAaATaTAcTCtGAcGAcTCaGGCAGCAGcGAtTGGGAtGAgGAaGAaaag
cCcgCGGGCAAaCGtTCacGtTCcAacAGcAGCAAggcctccAGCGaatccgaggacgaagaaaaggcgcctcagcggcccgttt
ttataaccacacgcgaggatcttaacaaattgcgtctatctCGCtaCAAaATGGAgCGatttgtgaacttgcCaATcTTtGAGag
CACtGTacTcAACTGcTTtGTccGgATaAgtATcGGaAACAATGGCCAgAAacccgtgtatcgagtggccgaaattgtgggaGTg
gttGAGACGGGgAAgATcTAcAgtCTgGGcACtaCAcGaACCAATCGtGGattgagaCTtAAGcACGGaAccCAgGAGCGgGTct
tccgactcgagttcaTtTcgAAcCAGGAGTTtACgGAgAaCGAGTTcaAcAAgTGGaacGAGgTcTGCcAgcAgtcgcacgtcca
gatgccaacgattgatctaatagcgatcaagcagaacgacatcaaaaaagcatTgAACTACGAaTTcAAGGACGAGGAcGTgGAC
AAgATcGTgGAGGAgAAGAAcCGCTTCCGgAAcCGaCCCACCAAtTAtGCgATGAAGAAaACCTGcCTgATGAAGGAGcGaGAtG
CaGCcATGtTgcGGGgtGAcTACGACaTtGCacaggatCTGgGaCAgCAaATCGAcgAgCTgGAGAaCCGaGCcTCtGAgCTcGA
cAAaaGaaGaTCcCAtAccCTcAAtcTgATcTCcTAcATaAacGAcaGgAAcaGgAAgaagAAtGTggAgGAcGCtGAgAAGGCa
ATttTaGAgGAGGCtCGgGCCAACAAaggcctcaagatctcgGATCCcTTcACaCGtCGcATtACtCAgCCgCGCATGGGcTTCA
AgGGtgccaagAAGGAcgaagatgacatgcaactggcaccactgccgccgccacccccaggaaaaaagaggcccaacgaagcagg
aacttcgagtgcaagcgtcaggtccacggactccaaggactacagtctctactcactgcatgactttgacattgacctagatgtt
ccgctaccaggtatgtaactaacgtattctgcagttgagcaatgggcataaccattttcttttttagtcaatacgAATtCagTGC
CcAAgCCGGCtagcaAaCCAgCtGAaACaGTcTCcAAaCGtTCgcTgAAtcTaGAgGAtTACAAAAaaaagCGcGGtCTtATcTA
Gaaaaggatgccgctggtcatacatatactgacaaagcgtcgcatgtttacgtcctagtttagtgtagtgcccaaatgaaatgaa
tacagcgatcgtttgcttcaacgactcaaccaacttaaagagcaacaaaaaaaacgacgggcaatcagctcggcttatagttaca
gttcatatatatatataataaggttgacacagaaagttttagataggtcgggcgaattgaatatcccaatcgaggatactttctc
tgtttgtgtttgttttgtttcactattatgatataatttttagaaaaattatgcaagcaacacttaagaatcaacagtaatttcg
aacatttggaatgcctatgcagataacgaacttatttaagtatatattgtgaaatttttaaagttttaagctaaaaatgttataa
cgaaaagagtaaaaccccatccagcctaatcatttccaacgatttgttccataaattaacaactaacataattaatacggaatta
gttttcagcgaagacttaatcgtttactcaggcaaatggcaaatttgaaggatattccatggacaaatatgaagaggattattga
aagggttatataagactcattcaagcgagtatgtatccgttggttgtaaccgttcaatgctgtattagattaaggcaaaattcat
cagttgtagcaacagctttcatatacttaaatatacatatataaatattatttataataaagaaaaagacttaaataatgttatt
gatctagtgttgggatactgtataggatttgttatcttgtatacttggcgcctattcccacataagcaccaatgaaaagtaaact
tatggtcaccattctggactgttggacagttggctcctcTTAATTGGTTTGCaGtcTGTTTGcGCAGCTGgctgactcctttcat
gttctcaccaaatTAATTcAATTAATTcGATgAAATTGTCTTTTAATTGAAcaCaATCGCgTTTCgtcagagggaaaaacgtttt
tcaagatctgcaaatatataaagagactttaacggtcaatatttgaaaggcatattcgagctaactccgctgcaatcgatcgaaa
tacatgctaaataggatgctaatttgaaataaacttgaattgatcgctatataatgcacttccgctcgaatattttccaagttgt
ttcgttc
Rtf1 Genomic Evodifferences ProfileBlack capital letters represent bases conserved in all species and colored bases represent sequences present in all species except D.simulans, D.sechellia, D.erecta, D.yakuba, D.ananassae, D.pseudoobscura, D.persimilis or D.mojavensis. |
gctctgctgcgcatgctccaaagctgagcttcaaagctccgagctcggcatttcgagggtggatcgtcgggggttgggtggttaa
tgcgaaatccatctacaggggtcgctgcgaaatggtcttgtattacagaatccgcagatcaacaaattaatgggaaaatatattg
tttacaggaattgagaaacttacgggcaagggtagttcataatgtttattatgtttcgaagggtcttattgaaggcatctttaaa
gtgaagcacacaattttaaaaagagatttatagtaacagaagaaataatttatttgttcatcacgttgagaactcactgttttga
aatatggtttttcggttgggcggtggcatcgggttggttgttttcatgagttgtcgcattgctgctgctctcgtcgtagtcgttg
ttgctGcaGAATGTGCACtTTGTTgaATGTgcaatgggcttcctcgtggcgctgttattgttgctacaactgcTGCTACTGCAAA
TTGCCaCGcAGCATTTAAGgCGAATTATGAAAgttcgtatgtgggtgcgtgttccaccctccaccccccaaaaaaaaacccaccc
ctttcgcccccgctggcagcatgaacttagggaaagcgcgctcgagggacctggaAAACGcCTGCATTTTAATTAATATTGATTG
TaAGcTATTTtatgtgtggggaaggggggcaGCAGGTgtGGcTTTAATTTAGTTTTCaAAATgTGTTTtTgCGtGGggcacaaac
aagtaCATAACCCACTTaccagcgtgcagacAaATGTTTGCCtATTACAGGGTACACAAAGTCAGcattcccgcccagccattcg
gtatcATCATGCAAATTGaAGGGGGctgggatagggataatgggGATGCCgAAATTTGCATTTcAATTCtgccgccgccggcatt
tccattcccctgcacctccacccacgtccccaccccaccccttaTGTTTaCcTTGCTcGAACAGCTTCGCcgTATTTTTTCAacT
ctGCTTTAAGTGTGATTCagTGTTgCGCTcGACAGCGCGGcAAAATGTGCACGTGCTGCaccagccGCAAggtatttccccgcag
tggtgggtggtaggtcctgtcgcgtcctgtccgagctcaaaaaactccaaaaggaattgggctcgagttcaaaataagcgattat
ttaagggtgtcacatgacatacaagggtaccaaattacttaaaaaggagagtctgatattttaaaatgaatcaatcaaagggact
actattcgttttaagttgtttttttttttttaacaattttacaagcaaaatgagttcgaagatagttgtcaaggatacaaagata
tacaattgtttatattcgctattattattgttactattaagttagaataacttgcttacataaaataaactgaatccaattgggt
aaattcacttaagctacacgtgaatttgaaaacacgatttgttgcttatttataaaaatataaataaaagtcggagattcccctt
gaatcccttttgaaactgttcccactcaatgtgttccctgggatcaaatagttttcccgcgcttacagctgacagctcgattact
gttgccagccctagcatatcgatagcacgtagcgaggacagacaaaatcccgataggccatatcacactcgttgccatctccaac
ggcacgcactaaaattttttcgttctgatttggttaaattttattattaagtaaaggccaggaaacgatcggaAATGGGcAAAcG
GCGGACgCAATCCCTgATCGACTCcAACTCcAGcGATAGcgacagcgagtccgagaccAAtcTGGAaTCGGTGAGTggctataga
atagatcaaatgcatcatccgcgcccctttctccatattgcgatgtaacgAAAaTCAATataaatactgaaaatacaccttatat
gtaatCcccAGGAcCTgaTGTCgcTcGCCAAGAAGCGaAAGAAGCCccaaacggcggccaagtcaagttcccgcTCCGACTCtGA
TTCcGAcTGGGCcAACAACAAAgCtGGaGCtCCctCgtCcAAGAAGAAGAAGCGtCaGAAGcCCAGcAGaGACTCcAGcTCcTCG
GAGTCcAAtTGGGAtGAcgacaGtCAGGAtGAGaggcagccagcgaggcagagtcctgcacagacgcaacaggagcacaAgCCcC
CGgAGCaggCctcccagcccgcCCAgctcAGcGAgcagGAgGAGGGcGAGGTcTCcGAtAGCGAtTCcGACAAgTCcAAGTCcaa
ctcCTCctcatccGGCTCCGACTCcTCtAGtTCtTCCTCCAGCTCcGActcggaatttGaCGAcgggTTCGATGATGacctcATG
GGCGAtgatGAGGAtCGaAGGCgtCTCAAtGgttTGTCcGAgAAGGAGCGtGAaActgaaatttacaagcgcattgagcagcgcg
agattatGCGaAcgCGcTGGGAaATCGAacggAAacTgAAgCTgGCaaGgCGcgGcgagAAAaaccaagAaAAgTCcAagaaCAA
aggagaacgggccAAgAAgAAGaaggaaaagcgcgagaagaaggcgaggaaagccagggaagcccaggcgcccttgccaactcaa
gcttccacatccacacttttagatgtcgaacccaagcccagcaacgaagtacggtcagcgagtccgttgtccacgcctgccctta
accgagatgcggcttccacttcagcggcagtggccagtattatgcccgacgatgcagcttcctccgctggcgtctctGAtTAcTT
TGATCACAAgGAaCGtTCCAAGGAGCGcAAGAAGAAcGTGGAGGCCAACAAgACgGAcGACAAGaGgAGcAATGCCATGGCCtTa
ttaaAAGCCAAaaGaGAgGGCAAGGCtAAaAGAGGTAaGcatcagtcgatcataatcgtcatacgactctaatgtgttgtttttt
ccattcaccTTGCAGAaGAGGAGGAaGCCAAacGcatgGCaGAAaaaGATCgtGAtGACGACAAaGAGGAACTcGAtAGCGTatc
tggttgtaAATCGGCcGTgAAaCTGAAAGCCTCtGAaATaTACTCtGACGACTCaGGCAGCAGcGAtTGGGAtGAGGAaGAAAAG
CCcgCGGGCAAaCGtTCaCGtTCcAacAGCAGCAAGGCcTCCAGCGAatCcgagGAcgaagaaaaggcgcctcagcggcccgttt
ttataaccacaCGcGAgGATCTtAACAAatTGCGtcTatctCGCtACAAaATGGAgCGaTTTGTgAAcTTGCCaATcTTTGAGaG
CACtGTacTcAACTGcTTTGTccGgATaAGtATcGGaAACAATGGCCAGAAacccgtgtatcgagtggccgaaattgtgggaGTG
gttGAGACGGGgAAgATcTACAgtCTgGGCACtaCACGaACCAATCGtGGatTgaGaCTtAAGCACGGaACcCAgGAGCGgGTcT
TCCGacTcGAgTTcATtTCgAAcCAGGAGTTtACgGAGAACGAGTTcAAcAAgTGGaAcGAGGTcTGCCAGCAgtcgCACGTcCA
GATGCCaaCgATtgatctaatagcgatcaagcagaacgacatcaaaaaagcatTGAACTACGAaTTCAAGGACGAGGAcGTgGAC
AAgATcGTGGAGGAGAAGAACCGCTTCCGgAAcCGaCCCACCAAtTATGCgATGAAGAAaACCTGCCTgATGAAGGAGcGaGAtG
CaGCcATGtTgCGGGgtGAcTACGACATtGCaCAGGAtCTGgGaCAGCAaATCGAcGAgCTGGAGAaCCGaGCCTCtGAgCTcGA
CAAAaGaAGATCcCAtACcCTcAATCTGATcTCcTAcATaAacGAcaGgAACaGgAAGAAGAAtGTggAgGAcGCtGAgAAGGCa
ATttTaGAGGAGGCtCGgGCCAACAAaGGcCtcAAGATcTCgGATCCcTTcACaCGtCGcATtACTCAgCCGCGCATGGGCTTCA
AGGGtGCcAAgAAGGAcGAaGAtGacatgcaactggCACCaCtGCCgCCGCCacccccaggaaaaaagaggcccaacgaagcagg
aacttcgagtgcaagcgtcaggtccacggactccaaggactacagtctctactcactgcatgactttgacattgacctagatgtt
ccgctaccaggtatgtaactaacgtattctgcagttgagcaatgggcataaccattttcttttttagtcaataCgAATTCaGTGC
CcAAgCCGGCtagcaAaCCAGCtGAAACaGTCTCCAAaCGtTCgcTgAAtCTaGAGGAtTACAAAAAaAAGCGCGGtCTtATCTA
GaaaaggatgccgctggtcatacatAtacTGACAaAGcgtcgcatgtTtaCGTCCTAGtttAGTGTAGTgcccaaatgaaatgaa
tacagcgatcgtttgcttcaacgactcaaccaacttaaagagcaacaaaaaaaacgacgggcaatcagctcggcttatagttaca
gttcatatatatatataataaggttgacacagaaagttttagataggtcgggcgaattgaatatcccaatcgaggatactttctc
tgtttgtgtttgttttgtttcactattatgatataatttttagaaaaattatgcaagcaacacttaagaatcaacagtaatttcg
aacatttggaatgcctatgcagataacgaacttatttaagtatatattgtgaaatttttaaagttttaagctaaaaatgttataa
cgaaaagagtaaaaccccatccagcctaatcatttccaacgatttgttccataaattaacaactaacataattaatacggaatta
gttttcagcgaagacttaatcgtttactcaggcaaatggcaaatttgaaggatattccatggacaaatatgaagaggattattga
aagggttatataagactcattcaagcgagtatgTATCCgtTGGTtGTAAcCGTTCAAtGCTgTAtTAGaTTaAGgcaaaaTTCAT
CAgTTgTAGCaacagctttcaTAtACTTAAaTaTACAtatATAAAtAttAtTtataATAAagAAAaagacttaaataatgttatt
gatctagtgttgggatactgtataggatttgttatcttgtatacttggcgcctattcccacataagcaccaatgaaaagtaaact
tatggtcaccattctggactgttggacaGTTGGctccTcTTAATTGGTTTGCaGtCTGTTTGcGCAGCTGgcTGACTCCTTTCAT
GTTCTCACcaAatTAATTcAATTAATTCGATGAAATTGTCTTTTAATTGAAcaCaATCGCgTTTCGtcagagggaaaaacgtttt
tcaagatctgcaaatatataaagagactttaacggtcaatatttgaaaggcatattcgagctaactccgctgcaatcgatcgaaa
tacatgctaaataggatgctaatttgaaataaacttgaattgatcgctatataatgcacttccgctcgaatattttccaagttgt
ttcgttct
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