knot/collier

Akerblad, P., Sigvardsson, M. and Leanderson, T. (1996). Early B-cell factor (EBF) down-regulates immunoglobulin heavy chain intron enhancer function in a plasmacytoma cell line. Scand. J. Immunol. 44(1): 89-92

Bally-Cuif, L., Dubois, L. and Vincent, A. (1998). Molecular cloning of Zcoe2, the zebrafish homolog of Xenopus Xcoe2 and mouse EBF-2, and its expression during primary neurogenesis. Mech. Dev. 77: 85-90

Corradi, A., et al. (2003). Hypogonadotropic hypogonadism and peripheral neuropathy in Ebf2-null mice. Development 130: 401-410. 12466206

Crozatier, M., et al. (1996). collier, a novel regulator of Drosophila head development, is expressed in a single mitotic domain. Curr. Biol. 6(6): 707-718. PubMed citation: 8793297

Crozatier, M. and Vincent, V. (1999a). Requirement for the Drosophila COE transcription factor Collier in formation of an embryonic muscle: transcriptional response to Notch signalling. Development 126: 1495-1504. PubMed citation: 10068642

Crozatier, M., et al. (1999b). Head versus trunk patterning in the Drosophila embryo; collier requirement for formation of the intercalary segment. Development 126: 4385-4394 . 10477305

Crozatier, M., Glise B. and Vincent, A. (2002). Connecting Hh, Dpp and EGF signalling in patterning of the Drosophila wing; the pivotal role of collier/knot in the AP organiser. Development 129: 4261-4269. 12183378

Crozatier, M., Glise, B., Khemici, V. and Vincent, A. (2003). Vein-positioning in the Drosophila wing in response to Hh; new roles of Notch signaling. Mech. Dev. 120: 529-535. 12782270

Crozatier, M., Ubeda, J.-M., Vincent, A. and Meister, M. (2004). Cellular immune response to parasitization in Drosophila requires the EBF orthologue Collier. PLoS Biology 2(8): E196. PubMed citation: 15314643

Dubois, L., et al. (1998). XCoe2, a transcription factor of the Col/Olf-1/EBF family involved in the specification of primary neurons in Xenopus. Curr. Biol. 8(4): 199-209

Dubois, L. and Vincent, A. (2001). The COE -- Collier/Olf1/EBF -- transcription factors: structural conservation and diversity of developmental functions. Mech. Dev. 108: 3-12. 11578857

Dubois, L., et al. (2007). collier transcription in a single Drosophila muscle lineage: the combinatorial control of muscle identity. Development 134: 4347-4355. PubMed Citation: 18003742

Erkman, L., et al. (2000). A POU domain transcription factor-dependent program regulates axon pathfinding in the vertebrate visual system, Neuron 28: 779-792

Estrada, B., Choe, S. E., Gisselbrecht, S. S., Michaud, S., Raj, L., Busser, B. W., Halfon, M. S., Church, G. M. and Michelson, A. M. (2006). An integrated strategy for analyzing the unique developmental programs of different myoblast subtypes. PLoS Genet. 2: e16. PubMed Citation: 16482229

Foe, V. E. (1989). Mitotic domains reveal early commitment of cells in Drosophila embryos. Development 107: 1-22. PubMed citation: 2516798

Garel, S., et al. (1997). Family of Ebf/Olf-1-related genes potentially involved in neuronal differentiation and regional specification in the central nervous system. Dev. Dyn. 210(3): 191-205.

Garel, S., et al. (1999). Ebf1 controls early cell differentiation in the embryonic striatum. Development 126: 5285-5294.

Garel, S., Garcia-Dominguez, M. and Charnay, P. (2000). Control of the migratory pathway of facial branchiomotor neurons. Development 127: 5297-5307. 11076752

Garel, S., et al. (2002). The early topography of thalamocortical projections is shifted in Ebf1 and Dlx1/2 mutant mice. Development 129: 5621-5634. 12421703

Garcia-Dominguez, M., et al. (2003). Ebf gene function is required for coupling neuronal differentiation and cell cycle exit. Development 130: 6013-6025. 14573522

Geling, A., et al. (2004). Her5 acts as a prepattern factor that blocks neurogenin1 and coe2 expression upstream of Notch to inhibit neurogenesis at the midbrain-hindbrain boundary. Development 131: 1993-2006. 15056616

Glise, B., Jones, D. L. and Ingham, P. W. (2002). Notch and Wingless modulate the response of cells to Hedgehog signaling in the Drosophila wing. Dev. Bio. 248: 93-106 . 12142023

Hagman, J., et al. (1993). Cloning and functional characterization of early B-cell factor, a regulator of lymphocyte-specific gene expression. Genes Dev. 7(5): 760-773

Hagman J., et al. (1995). EBF contains a novel zinc coordination motif and multiple dimerization and transcriptional activation domains. EMBO J. 14(12): 2907-2916

Hersh, B. M. and Carroll, S. B. (2005). Direct regulation of knot gene expression by Ultrabithorax and the evolution of cis-regulatory elements in Drosophila. Development 132(7): 1567-77. 15753212

Huang, J., Blackwell, T. K., Kedes, L. and Weintraub, H. (1996). Differences between MyoD DNA binding and activation site requirements revealed by functional random sequence selection. Mol. Cell. Biol. 16: 3893-3900. PubMed Citation: 8668207

Jimenez, M. A., Akerblad, P., Sigvardsson, M. and Rosen, E. D. (2006). Critical role for Ebf1 and Ebf2 in the adipogenic transcriptional cascade. Mol. Cell. Biol. 27(2): 743-57. PubMed citation: 17060461

Jinushi-Nakao, S., et al. (2007). Knot/Collier and Cut control different aspects of dendrite cytoskeleton and synergize to define final arbor shape. Neuron 56: 963-978. PubMed citation: 18093520

Kophengnavong, T., Michnowicz, J. E. and Blackwell, T. K. (2000). Establishment of distinct MyoD, E2A, and twist DNA binding specificities by different basic region-DNA conformations. Mol. Cell. Biol. 20: 261-272. PubMed Citation: 10594029

Lin, H. and Grosschedl, R. (1995). Failure of B-cell differentiation in mice lacking the transcription factor EBF. Nature 376(6537): 263-267

Liu, M., et al. (2008). Two levels of protection for the B cell genome during somatic hypermutation. Nature 451(7180): 841-5. PubMed citation: 18273020

Malgaretti, N., et al. (1997). Mmot1, a new helix-loop-helix transcription factor gene displaying a sharp expression boundary in the embryonic mouse brain. J. Biol. Chem. 272(28): 17632-17639

Martensson, A. and Martensson, I. L. (1997). Early B cell factor binds to a site critical for lambda5 core enhancer activity. Eur. J. Immunol. 27(1): 315-320

Milatovich A., et al. (1994). Gene for a tissue-specific transcriptional activator (EBF or Olf-1), expressed in early B lymphocytes, adipocytes, and olfactory neurons, is located on human chromosome 5, band q34, and proximal mouse chromosome 11. Mamm. Genome 5(4): 211-215

Mohler, J., et al. (2000). Activation of knot(kn) specifies the 3-4 intervein region in the Drosophila wing. Development 127: 55-63.. PubMed citation: 10654600

Nestoras, K., Lee, H. and Mohler, J. (1997). Role of knot (kn) in wing patterning in Drosophila. Genetics 147(3): 1203-1212. PubMed citation: 9383063

Philippakis, A. A., Busser, B. W., Gisselbrecht, S. S., He, F. S., Estrada, B., Michelson, A. M. and Bulyk, M. L. (2006). Expression-guided in silico evaluation of candidate cis regulatory codes for Drosophila muscle founder cells. PLoS Comput. Biol. 2: e53. PubMed Citation: 16733548

Pongubala, J. M., et al. (2008). Transcription factor EBF restricts alternative lineage options and promotes B cell fate commitment independently of Pax5. Nat. Immunol. 9(2): 203-15. PubMed citation: 18176567

Prasad, B., et al. (1998). unc-3, a gene required for axonal guidance in Caenorhabditis elegans, encodes a member of the O/E family of transcription factors. Development 125(8): 1561-1568. 9502737

Roessler, S., et al. (2006). Distinct promoters mediate the regulation of Ebf1 gene expression by interleukin-7 and Pax5. Mol. Cell. Biol. 27(2): 579-94. PubMed citation: 17101802

Sandmann, T., Girardot, C., Brehme, M., Tongprasit, W., Stolc, V. and Furlong, E. E. (2007). A core transcriptional network for early mesoderm development in Drosophila melanogaster. Genes Dev. 21: 436-449. PubMed Citation: 17322403

Seecoomar, M., et al. (2000). knot is required for the hypopharyngeal lobe and its derivatives in the Drosophila embryo. Mech. Dev. 91: 209-215. PubMed citation: 10704845

Sigvardsson, M., Akerblad, P. and Leanderson, T. (1996). Early B cell factor interacts with a subset of kappa promoters. J. Immunol. 156(10): 3788-3796

Sigvardsson, M., O'Riordan, M. and Grosschedl, R. (1997). EBF and E47 collaborate to induce expression of the endogenous immunoglobulin surrogate light chain genes. Immunity 7(1): 25-36

Sturtevant, M. A, Bier E (1995). Analysis of the genetic hierarchy guiding wing vein development in Drosophila. Development 121(3): 785-801. PubMed citation: 7720583

Svendsen, P. C., et al. (2000). The combgap locus encodes a zinc-finger protein that regulates cubitus interruptus during limb development in Drosophila melanogaster. Development 127: 4083-4093. PubMed citation: 10976041

Talikka, M., Perez, S. E. and Zimmerman, K. (2002). Distinct patterns of downstream target activation are specified by the helix-loop-helix domain of proneural basic helix-loop-helix transcription factors. Dev. Bio. 247: 137-148. 12074558

Travis, A, et al. (1993). Purification of early-B-cell factor and characterization of its DNA-binding specificity. Mol. Cell. Biol. 13(6): 3392-3400

Végh, M. and Basler, K. (2003). A genetic screen for hedgehog targets involved in the maintenance of the Drosophila anteroposterior compartment boundary. Genetics 163: 1427-1438. 12702686

Vervoort, M., Crozatier, M., Valle, D. and Vincent, A. (1999). The COE transcription factor Collier is a mediator of short-range Hedgehog-induced patterning of the Drosophila wing. Curr. Biol. 9(12): 632-9. PubMed citation: 10375526

Vincent, A., Blankenship, J. T. and Wieschaus, E. (1997). Integration of the head and trunk segmentation systems controls cephalic furrow formation in Drosophila. Development 124(19): 3747-3754. PubMed citation: 9367430

Wang, S. S., Tsai, R. Y. L., Reed, R. R. (1997). The characterization of the Olf-1/EBF-like HLH transcription factor family: implications in olfactory gene regulation and neuronal development. J. Neurosci. 17(11): 4149-4158

Wang, S. S., Lewcock, J. W., Feinstein, P., Mombaerts, P. and Reed, R.R. (2004). Genetic disruptions of O/E2 and O/E3 genes reveal involvement in olfactory receptor neuron projection. Development 131(6): 1377-88. 14993187

date revised: 20 August 2008

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